8PE1 | pdb_00008pe1

Crystal structure of Gel4 in complex with Nanobody 4

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth B]		e8pe1B01	A: a/b three-layered sandwiches	X: ATP-grasp_6	H: ATP-grasp_6	T: ATP-grasp_6	F:	ECOD (v294.1)
C		e8pe1C01	A: a/b three-layered sandwiches	X: ATP-grasp_6	H: ATP-grasp_6	T: ATP-grasp_6	F:	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth A]	PF07983	X8 domain (X8)	X8 domain	The X8 domain [2] domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen [1] as well as at the C-terminus of several families of glycosyl hydrolases [2]. T ...	The X8 domain [2] domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen [1] as well as at the C-terminus of several families of glycosyl hydrolases [2]. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains [4,5].	Domain
A [auth B], B [auth A]	PF03198	Glucanosyltransferase (Glyco_hydro_72)	Glucanosyltransferase	This is a family of glycosylphosphatidylinositol-anchored beta(1-3)glucanosyltransferases. The active site residues in the Aspergillus fumigatus example Swiss:B0XT72 are the two glutamate residues at 160 and 261 [3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A]	1,3-beta-glucanosyltransferase	glucanosyltransferase activity transferase activity 1,3-beta-glucanosyltransferase activity catalytic activity	fungal-type cell wall organization cellular component organization fungal-type cell wall organization or biogenesis cell wall organization or biogenesis cell wall organization cellular process cellular component organization or biogenesis external encapsulating structure organization fungal-type cell wall beta-glucan metabolic process fungal-type cell wall polysaccharide biosynthetic process glucan biosynthetic process cell wall beta-glucan metabolic process (1->3)-beta-D-glucan metabolic process cellular component biogenesis fungal-type cell wall organization cellular component organization fungal-type cell wall organization or biogenesis cell wall organization or biogenesis cell wall organization cellular process cellular component organization or biogenesis external encapsulating structure organization fungal-type cell wall beta-glucan metabolic process fungal-type cell wall polysaccharide biosynthetic process glucan biosynthetic process cell wall beta-glucan metabolic process (1->3)-beta-D-glucan metabolic process cellular component biogenesis fungal-type cell wall beta-glucan biosynthetic process beta-glucan biosynthetic process glucan metabolic process polysaccharide metabolic process fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process cell wall (1->3)-beta-D-glucan metabolic process cell wall polysaccharide metabolic process carbohydrate metabolic process beta-glucan metabolic process polysaccharide biosynthetic process carbohydrate biosynthetic process primary metabolic process (1->3)-beta-D-glucan biosynthetic process macromolecule biosynthetic process cell wall beta-glucan biosynthetic process cell wall biogenesis biosynthetic process cell wall macromolecule biosynthetic process fungal-type cell wall (1->3)-beta-D-glucan metabolic process cell wall polysaccharide biosynthetic process metabolic process cell wall (1->3)-beta-D-glucan biosynthetic process macromolecule metabolic process fungal-type cell wall biogenesis fungal-type cell wall polysaccharide metabolic process cell wall macromolecule metabolic process	cellular anatomical structure membrane side of membrane cell periphery plasma membrane fungal-type cell wall external encapsulating structure extracellular region cell wall membrane-bounded organelle organelle vesicle
C, D	Nanobody 4	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A]	IPR004886	Glucanosyltransferase	Family
A [auth B], B [auth A]	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A [auth B], B [auth A]	IPR012946	X8 domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.