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8PAG
|
pdb_00008pag
Crystal structure of the ectodomain of Norway rat pestivirus E2 glycoprotein
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Genome polyprotein
serine-type exopeptidase activity
peptidase activity
serine hydrolase activity
catalytic activity, acting on a protein
serine-type peptidase activity
hydrolase activity
exopeptidase activity
catalytic activity
cysteine-type peptidase activity
cysteine-type endopeptidase activity
endopeptidase activity
RNA-directed RNA polymerase activity
5'-3' RNA polymerase activity
catalytic activity, acting on RNA
serine-type exopeptidase activity
peptidase activity
serine hydrolase activity
catalytic activity, acting on a protein
serine-type peptidase activity
hydrolase activity
exopeptidase activity
catalytic activity
cysteine-type peptidase activity
cysteine-type endopeptidase activity
endopeptidase activity
RNA-directed RNA polymerase activity
5'-3' RNA polymerase activity
catalytic activity, acting on RNA
catalytic activity, acting on a nucleic acid
RNA polymerase activity
transferase activity
nucleotidyltransferase activity
transferase activity, transferring phosphorus-containing groups
serine-type endopeptidase activity
RNA binding
binding
nucleic acid binding
guanyl nucleotide binding
GTP binding
nucleotide binding
guanyl ribonucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
anion binding
heterocyclic compound binding
carbohydrate derivative binding
ribonucleotide binding
small molecule binding
adenyl ribonucleotide binding
adenyl nucleotide binding
ATP binding
pyrophosphatase activity
ribonucleoside triphosphate phosphatase activity
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
hydrolase activity, acting on acid anhydrides
passive transmembrane transporter activity
channel activity
transporter activity
transmembrane transporter activity
phosphorus-oxygen lyase activity
endonuclease activity
nuclease activity
RNA endonuclease activity
RNA nuclease activity
lyase activity
ribonuclease T2 activity
nucleic acid conformation isomerase activity
isomerase activity
helicase activity
RNA helicase activity
ATP-dependent activity, acting on RNA
macromolecular conformation isomerase activity
ATP-dependent activity
Less
viral process
fusion of virus membrane with host endosome membrane
membrane fusion involved in viral entry into host cell
RNA metabolic process
viral life cycle
primary metabolic process
nucleobase-containing compound biosynthetic process
macromolecule biosynthetic process
nucleic acid metabolic process
RNA biosynthetic process
nucleobase-containing compound metabolic process
nucleic acid biosynthetic process
viral genome replication
biosynthetic process
viral process
fusion of virus membrane with host endosome membrane
membrane fusion involved in viral entry into host cell
RNA metabolic process
viral life cycle
primary metabolic process
nucleobase-containing compound biosynthetic process
macromolecule biosynthetic process
nucleic acid metabolic process
RNA biosynthetic process
nucleobase-containing compound metabolic process
nucleic acid biosynthetic process
viral genome replication
biosynthetic process
viral RNA genome replication
metabolic process
cellular process
macromolecule metabolic process
symbiont-mediated perturbation of host defense response
symbiont-mediated perturbation of host cellular process
biological process involved in interspecies interaction between organisms
symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway
symbiont-mediated perturbation of host immune response
biological process involved in interaction with host
symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity
biological process involved in symbiotic interaction
symbiont-mediated suppression of host signal transduction pathway
symbiont-mediated suppression of host immune response
symbiont-mediated suppression of host innate immune response
symbiont-mediated perturbation of host process
symbiont-mediated perturbation of host innate immune response
symbiont-mediated perturbation of host signal transduction pathway
modulation of process of another organism
symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway
symbiont entry into host cell
symbiont entry into host
transmembrane transport
localization
transport
monoatomic ion transmembrane transport
monoatomic ion transport
establishment of localization
viral gene expression
viral protein processing
virion attachment to host cell
adhesion of symbiont to host cell
adhesion of symbiont to host
symbiont-mediated perturbation of host autophagy
symbiont-mediated activation of host autophagy
proteolysis
protein metabolic process
Less
host cellular component
host intracellular part
cellular anatomical structure
host cell cytoplasm
host cell part
host intracellular region
other organism part
virion component
virion membrane
host cell membrane
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR030399
Pestivirus NS2, peptidase C74
Domain
A
IPR008751
Peptidase C53, pestivirus Npro
Domain
A
IPR043128
Reverse transcriptase/Diguanylate cyclase domain
Homologous Superfamily
A
IPR000280
Pestivirus NS3, peptidase S31
Domain
A
IPR011545
DEAD/DEAH-box helicase domain
Domain
A
IPR027417
P-loop containing nucleoside triphosphate hydrolase
Homologous Superfamily
A
IPR002166
RNA dependent RNA polymerase, hepatitis C virus
Family
A
IPR001650
Helicase, C-terminal domain-like
Domain
A
IPR042311
Pestivirus envelope glycoprotein E2, domain D
Homologous Superfamily
A
IPR021824
Capsid protein C, pestivirus
Domain
A
IPR043502
DNA/RNA polymerase superfamily
Homologous Superfamily
A
IPR014001
Helicase superfamily 1/2, ATP-binding domain
Domain
A
IPR032521
Pestivirus envelope glycoprotein E2
Domain
A
IPR022120
Pestivirus nonstructural protein 2
Family
A
IPR049486
Flavivridae NS3 helicase, C-terminal helical domain
Domain
A
IPR007094
RNA-directed RNA polymerase, catalytic domain
Domain
A
IPR036430
Ribonuclease T2-like superfamily
Homologous Superfamily
A
IPR033130
Ribonuclease T2, His active site 2
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