8P60 | pdb_00008p60

Spraguea lophii ribosome dimer

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
BC [auth KC0],
F [auth LC0]		PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
HC [auth KF0],
L [auth LF0]		PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
IC [auth KFF],
M [auth LFF]		PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
JC [auth KG0],
N [auth LG0]		PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
BA [auth LOO],
XC [auth KOO]		PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
AD [auth KQ0],
EA [auth LQ0]		PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
HD [auth KX0],
LA [auth LX0]		PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
EE [auth RL0],
IB [auth SL0]		PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
EE [auth RL0],
IB [auth SL0]		PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
ME [auth RU0],
QB [auth SU0]		PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
OE [auth RW0],
SB [auth SW0]		PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
QE [auth RY0],
UB [auth SY0]		PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
EC [auth KDD],
I [auth LDD]		PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
DC [auth KD0],
H [auth LD0]		PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
DC [auth KD0],
H [auth LD0]		PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
SE [auth SP0],
TE [auth RP0]		PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
NE [auth RV0],
RB [auth SV0]		PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
CC [auth KCC],
G [auth LCC]		PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
LE [auth RT0],
PB [auth ST0]		PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
KE [auth RS0],
OB [auth SS0]		PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
IE [auth RQ0],
MB [auth SQ0]		PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
HE [auth RO0],
LB [auth SO0]		PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
FE [auth RM0],
JB [auth SM0]		PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
DE [auth RK0],
HB [auth SK0]		PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
CE [auth RJ0],
GB [auth SJ0]		PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
BE [auth RI0],
FB [auth SI0]		PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
DB [auth SGG],
ZD [auth RGG]		PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
BB [auth SFF],
XD [auth RFF]		PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
AB [auth SF0],
WD [auth RF0]		PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
UD [auth RE0],
YA [auth SE0]		PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
UD [auth RE0],
YA [auth SE0]		PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
UD [auth RE0],
YA [auth SE0]		PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
TD [auth RDD],
XA [auth SDD]		PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
SD [auth RD0],
WA [auth SD0]		PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
QD [auth RC0],
UA [auth SC0]		PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
QD [auth RC0],
UA [auth SC0]		PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
MD [auth RA0],
QA [auth SA0]		PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
KD [auth MD2],
OA [auth MD1]		PF05907CXXC motif containing zinc binding protein, eukaryotic (CXXC_Zn-b_euk)CXXC motif containing zinc binding protein, eukaryotic- Family
JD [auth KZ0],
NA [auth LZ0]		PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
ID [auth KY0],
MA [auth LY0]		PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
ID [auth KY0],
MA [auth LY0]		PF00467KOW motif (KOW)KOW motif- Family
GD [auth KW0],
KA [auth LW0]		PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
FD [auth KV0],
JA [auth LV0]		PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
ED [auth KU0],
IA [auth LU0]		PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
CD [auth KS0],
GA [auth LS0]		PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
BD [auth KR0],
FA [auth LR0]		PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
CA [auth LP0],
YC [auth KP0]		PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
AA [auth LO0],
WC [auth KO0]		PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
VC [auth KN0],
Z [auth LN0]		PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
UC [auth KMM],
Y [auth LMM]		PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
SC [auth KLL],
W [auth LLL]		PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
RC [auth KL0],
V [auth LL0]		PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
PC [auth KJ0],
T [auth LJ0]		PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
PC [auth KJ0],
T [auth LJ0]		PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
OC [auth KII],
S [auth LII]		PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
NC [auth KI0],
R [auth LI0]		PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
LC [auth KH0],
P [auth LH0]		PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
GC [auth KEE],
K [auth LEE]		PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth L50],
WB [auth K50]		RNA 28S---
C [auth LA0],
YB [auth KA0]		60S ribosomal protein L8---
BC [auth KC0],
F [auth LC0]		60S ribosomal protein L4
HC [auth KF0],
L [auth LF0]		60S ribosomal protein L7
IC [auth KFF],
M [auth LFF]		60S ribosomal protein L35a
JC [auth KG0],
N [auth LG0]		60S ribosomal protein L8 -
QC [auth KJJ],
U [auth LJJ]		60S ribosomal protein L37---
BA [auth LOO],
XC [auth KOO]		60S ribosomal protein L44
AD [auth KQ0],
EA [auth LQ0]		60S ribosomal protein L18
DD [auth KT0],
HA [auth LT0]		60s ribosomal protein L21
HD [auth KX0],
LA [auth LX0]		60S ribosomal protein L23a
AE [auth RH0],
EB [auth SH0]		40S ribosomal protein S7
EE [auth RL0],
IB [auth SL0]		40S ribosomal protein S11
JE [auth RR0],
NB [auth SR0]		40S ribosomal protein S17---
ME [auth RU0],
QB [auth SU0]		40S ribosomal protein S20- -
OE [auth RW0],
SB [auth SW0]		40S ribosomal protein S15A
QE [auth RY0],
UB [auth SY0]		40s ribosomal protein s24
RE [auth RZ0],
VB [auth SZ0]		40S ribosomal protein S25- -
EC [auth KDD],
I [auth LDD]		60S ribosomal protein L31
DC [auth KD0],
H [auth LD0]		60S ribosomal protein L5
SE [auth SP0],
TE [auth RP0]		Ribosomal protein S19
PE [auth RX0],
TB [auth SX0]		Ribosomal protein S12/S23---
NE [auth RV0],
RB [auth SV0]		Ribosomal protein S21E
CC [auth KCC],
G [auth LCC]		60S ribosomal protein L3 -
LE [auth RT0],
PB [auth ST0]		40S Ribosomal protein S19
KE [auth RS0],
OB [auth SS0]		40S ribosomal protein S18
IE [auth RQ0],
MB [auth SQ0]		40S ribosomal protein S16
HE [auth RO0],
LB [auth SO0]		40S ribosomal protein S14
GE [auth RN0],
KB [auth SN0]		40S ribosomal protein S13
FE [auth RM0],
JB [auth SM0]		40S ribosomal protein S12- -
DE [auth RK0],
HB [auth SK0]		40S ribosomal protein S10 -
CE [auth RJ0],
GB [auth SJ0]		40S ribosomal protein S9
BE [auth RI0],
FB [auth SI0]		40S ribosomal protein S8
DB [auth SGG],
ZD [auth RGG]		Guanine nucleotide binding protein beta subunit - -
CB [auth SG0],
YD [auth RG0]		40S ribosomal protein S6---
BB [auth SFF],
XD [auth RFF]		Ubiquitin/40s ribosomal protein S27a fusion
AB [auth SF0],
WD [auth RF0]		40S ribosomal protein S5
VD [auth REE],
ZA [auth SEE]		40S ribosomal protein S30---
UD [auth RE0],
YA [auth SE0]		40S ribosomal protein S4
TD [auth RDD],
XA [auth SDD]		40S ribosomal protein S29
AC [auth KB0],
E [auth LB0]		60S ribosomal protein L3
SD [auth RD0],
WA [auth SD0]		40S ribosomal protein S3
RD [auth RCC],
VA [auth SCC]		40S ribosomal protein S28---
QD [auth RC0],
UA [auth SC0]		40S ribosomal protein S2
PD [auth RBB],
TA [auth SBB]		40S ribosomal protein S27---
OD [auth RB0],
SA [auth SB0]		40S ribosomal protein S1---
ND [auth RAA],
RA [auth SAA]		40S ribosomal protein S26
MD [auth RA0],
QA [auth SA0]		40S ribosomal protein S0
LD [auth R60],
PA [auth S60]		RNA 16S---
KD [auth MD2],
OA [auth MD1]		DNL-type domain-containing protein- - -
JD [auth KZ0],
NA [auth LZ0]		60S ribosomal protein L27
D [auth LAA],
ZB [auth KAA]		Ribosomal protein L18e/L15P---
ID [auth KY0],
MA [auth LY0]		60S ribosomal protein L26
GD [auth KW0],
KA [auth LW0]		Ribosomal protein L24E- -
FD [auth KV0],
JA [auth LV0]		Ribosomal protein L23
ED [auth KU0],
IA [auth LU0]		60S ribosomal protein L22
CD [auth KS0],
GA [auth LS0]		60S ribosomal protein L20
BD [auth KR0],
FA [auth LR0]		60S ribosomal protein L19
DA [auth LPP],
ZC [auth KPP]		60S ribosomal protein L37a---
CA [auth LP0],
YC [auth KP0]		60S ribosomal protein L17
AA [auth LO0],
WC [auth KO0]		Ribosomal protein L13A
VC [auth KN0],
Z [auth LN0]		Ribosomal protein L15
UC [auth KMM],
Y [auth LMM]		Ubiquitin
TC [auth KM0],
X [auth LM0]		Transposase- - -
SC [auth KLL],
W [auth LLL]		60S ribosomal protein L39
RC [auth KL0],
V [auth LL0]		60S ribosomal protein L13
PC [auth KJ0],
T [auth LJ0]		60S ribosomal protein L11
B [auth L70],
XB [auth K70]		RNA 5S---
OC [auth KII],
S [auth LII]		60S ribosomal protein L36
NC [auth KI0],
R [auth LI0]		S60 ribosomal protein L10
MC [auth KHH],
Q [auth LHH]		Ribosomal L29 protein---
LC [auth KH0],
P [auth LH0]		60S ribosomal protein L9
KC [auth KGG],
O [auth LGG]		Ribosomal protein L34
GC [auth KEE],
K [auth LEE]		60S ribosomal protein L32
FC [auth KE0],
J [auth LE0]		60S ribosomal protein L6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
BC [auth KC0],
F [auth LC0]		IPR002136Large ribosomal subunit protein uL4Family
BC [auth KC0],
F [auth LC0]		IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
BC [auth KC0],
F [auth LC0]		IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
HC [auth KF0],
L [auth LF0]		IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
HC [auth KF0],
L [auth LF0]		IPR039699Large ribosomal subunit protein uL30Family
HC [auth KF0],
L [auth LF0]		IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
HC [auth KF0],
L [auth LF0]		IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
HC [auth KF0],
L [auth LF0]		IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
IC [auth KFF],
M [auth LFF]		IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
IC [auth KFF],
M [auth LFF]		IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IC [auth KFF],
M [auth LFF]		IPR001780Large ribosomal subunit protein eL33Family
JC [auth KG0],
N [auth LG0]		IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
JC [auth KG0],
N [auth LG0]		IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
JC [auth KG0],
N [auth LG0]		IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
JC [auth KG0],
N [auth LG0]		IPR018492Ribosomal protein eL8/Nhp2 familyFamily
JC [auth KG0],
N [auth LG0]		IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
BA [auth LOO],
XC [auth KOO]		IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
BA [auth LOO],
XC [auth KOO]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth LOO],
XC [auth KOO]		IPR000552Large ribosomal subunit protein eL42Family
AD [auth KQ0],
EA [auth LQ0]		IPR021131Large ribosomal subunit protein uL15/eL18Domain
AD [auth KQ0],
EA [auth LQ0]		IPR000039Large ribosomal subunit protein eL18Family
AD [auth KQ0],
EA [auth LQ0]		IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DD [auth KT0],
HA [auth LT0]		IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
DD [auth KT0],
HA [auth LT0]		IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
DD [auth KT0],
HA [auth LT0]		IPR001147Large ribosomal subunit protein eL21Family
DD [auth KT0],
HA [auth LT0]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HD [auth KX0],
LA [auth LX0]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
HD [auth KX0],
LA [auth LX0]		IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
HD [auth KX0],
LA [auth LX0]		IPR013025Large ribosomal subunit protein uL23-likeFamily
AE [auth RH0],
EB [auth SH0]		IPR000554Small ribosomal subunit protein eS7Family
EE [auth RL0],
IB [auth SL0]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
EE [auth RL0],
IB [auth SL0]		IPR000266Small ribosomal subunit protein uS17Family
EE [auth RL0],
IB [auth SL0]		IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
ME [auth RU0],
QB [auth SU0]		IPR027486Small ribosomal subunit protein uS10 domainDomain
ME [auth RU0],
QB [auth SU0]		IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
OE [auth RW0],
SB [auth SW0]		IPR000630Small ribosomal subunit protein uS8Family
OE [auth RW0],
SB [auth SW0]		IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
QE [auth RY0],
UB [auth SY0]		IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
QE [auth RY0],
UB [auth SY0]		IPR001976Small ribosomal subunit protein eS24Family
QE [auth RY0],
UB [auth SY0]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
RE [auth RZ0],
VB [auth SZ0]		IPR004977Small ribosomal subunit protein eS25Family
EC [auth KDD],
I [auth LDD]		IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
EC [auth KDD],
I [auth LDD]		IPR000054Large ribosomal subunit protein eL31Family
DC [auth KD0],
H [auth LD0]		IPR057268Large ribosomal subunit protein uL18Family
DC [auth KD0],
H [auth LD0]		IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
DC [auth KD0],
H [auth LD0]		IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
SE [auth SP0],
TE [auth RP0]		IPR002222Small ribosomal subunit protein uS19Family
SE [auth SP0],
TE [auth RP0]		IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
SE [auth SP0],
TE [auth RP0]		IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
NE [auth RV0],
RB [auth SV0]		IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
NE [auth RV0],
RB [auth SV0]		IPR001931Small ribosomal subunit protein eS21Family
CC [auth KCC],
G [auth LCC]		IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
CC [auth KCC],
G [auth LCC]		IPR039109Large ribosomal subunit protein eL30-likeFamily
CC [auth KCC],
G [auth LCC]		IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
LE [auth RT0],
PB [auth ST0]		IPR001266Small ribosomal subunit protein eS19Family
LE [auth RT0],
PB [auth ST0]		IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
LE [auth RT0],
PB [auth ST0]		IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
KE [auth RS0],
OB [auth SS0]		IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
KE [auth RS0],
OB [auth SS0]		IPR001892Small ribosomal subunit protein uS13Family
KE [auth RS0],
OB [auth SS0]		IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
IE [auth RQ0],
MB [auth SQ0]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IE [auth RQ0],
MB [auth SQ0]		IPR000754Small ribosomal subunit protein uS9Family
IE [auth RQ0],
MB [auth SQ0]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
HE [auth RO0],
LB [auth SO0]		IPR001971Small ribosomal subunit protein uS11Family
HE [auth RO0],
LB [auth SO0]		IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
GE [auth RN0],
KB [auth SN0]		IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
GE [auth RN0],
KB [auth SN0]		IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
GE [auth RN0],
KB [auth SN0]		IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
GE [auth RN0],
KB [auth SN0]		IPR000589Small ribosomal subunit protein uS15Family
FE [auth RM0],
JB [auth SM0]		IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
FE [auth RM0],
JB [auth SM0]		IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
DE [auth RK0],
HB [auth SK0]		IPR037447Small ribosomal subunit protein eS10Family
DE [auth RK0],
HB [auth SK0]		IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
DE [auth RK0],
HB [auth SK0]		IPR005326Plectin/eS10, N-terminalDomain
CE [auth RJ0],
GB [auth SJ0]		IPR002942RNA-binding S4 domainDomain
CE [auth RJ0],
GB [auth SJ0]		IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
CE [auth RJ0],
GB [auth SJ0]		IPR022801Small ribosomal subunit protein uS4Family
CE [auth RJ0],
GB [auth SJ0]		IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
BE [auth RI0],
FB [auth SI0]		IPR001047Small ribosomal subunit protein eS8Family
BE [auth RI0],
FB [auth SI0]		IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
DB [auth SGG],
ZD [auth RGG]		IPR045223Small ribosomal subunit protein RACK1-likeFamily
DB [auth SGG],
ZD [auth RGG]		IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
DB [auth SGG],
ZD [auth RGG]		IPR001680WD40 repeatRepeat
DB [auth SGG],
ZD [auth RGG]		IPR019775WD40 repeat, conserved siteConserved Site
DB [auth SGG],
ZD [auth RGG]		IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
DB [auth SGG],
ZD [auth RGG]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
BB [auth SFF],
XD [auth RFF]		IPR019954Ubiquitin conserved siteConserved Site
BB [auth SFF],
XD [auth RFF]		IPR000626Ubiquitin-like domainDomain
BB [auth SFF],
XD [auth RFF]		IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
BB [auth SFF],
XD [auth RFF]		IPR002906Small ribosomal subunit protein eS31Domain
BB [auth SFF],
XD [auth RFF]		IPR019956Ubiquitin domainDomain
BB [auth SFF],
XD [auth RFF]		IPR050158Ubiquitin and ubiquitin-likeFamily
BB [auth SFF],
XD [auth RFF]		IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
BB [auth SFF],
XD [auth RFF]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AB [auth SF0],
WD [auth RF0]		IPR000235Small ribosomal subunit protein uS7Family
AB [auth SF0],
WD [auth RF0]		IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
AB [auth SF0],
WD [auth RF0]		IPR023798Small ribosomal subunit protein uS7 domainDomain
AB [auth SF0],
WD [auth RF0]		IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
UD [auth RE0],
YA [auth SE0]		IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
UD [auth RE0],
YA [auth SE0]		IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
UD [auth RE0],
YA [auth SE0]		IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
UD [auth RE0],
YA [auth SE0]		IPR002942RNA-binding S4 domainDomain
UD [auth RE0],
YA [auth SE0]		IPR013845Small ribosomal subunit protein eS4, central regionDomain
UD [auth RE0],
YA [auth SE0]		IPR000876Small ribosomal subunit protein eS4Family
UD [auth RE0],
YA [auth SE0]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
UD [auth RE0],
YA [auth SE0]		IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
UD [auth RE0],
YA [auth SE0]		IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
UD [auth RE0],
YA [auth SE0]		IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
TD [auth RDD],
XA [auth SDD]		IPR001209Small ribosomal subunit protein uS14Family
TD [auth RDD],
XA [auth SDD]		IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
TD [auth RDD],
XA [auth SDD]		IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
TD [auth RDD],
XA [auth SDD]		IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
AC [auth KB0],
E [auth LB0]		IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
AC [auth KB0],
E [auth LB0]		IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
AC [auth KB0],
E [auth LB0]		IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
AC [auth KB0],
E [auth LB0]		IPR000597Large ribosomal subunit protein uL3Family
AC [auth KB0],
E [auth LB0]		IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
SD [auth RD0],
WA [auth SD0]		IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
SD [auth RD0],
WA [auth SD0]		IPR057258Small ribosomal subunit protein uS3Family
SD [auth RD0],
WA [auth SD0]		IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
SD [auth RD0],
WA [auth SD0]		IPR015946K homology domain-like, alpha/betaHomologous Superfamily
SD [auth RD0],
WA [auth SD0]		IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
QD [auth RC0],
UA [auth SC0]		IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
QD [auth RC0],
UA [auth SC0]		IPR000851Small ribosomal subunit protein uS5Family
QD [auth RC0],
UA [auth SC0]		IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
QD [auth RC0],
UA [auth SC0]		IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
QD [auth RC0],
UA [auth SC0]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QD [auth RC0],
UA [auth SC0]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
ND [auth RAA],
RA [auth SAA]		IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
ND [auth RAA],
RA [auth SAA]		IPR000892Small ribosomal subunit protein eS26Family
MD [auth RA0],
QA [auth SA0]		IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
MD [auth RA0],
QA [auth SA0]		IPR001865Small ribosomal subunit protein uS2Family
MD [auth RA0],
QA [auth SA0]		IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
KD [auth MD2],
OA [auth MD1]		IPR008584CXXC motif containing zinc binding protein, eukaryoticFamily
JD [auth KZ0],
NA [auth LZ0]		IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
JD [auth KZ0],
NA [auth LZ0]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JD [auth KZ0],
NA [auth LZ0]		IPR001141Large ribosomal subunit protein eL27Family
ID [auth KY0],
MA [auth LY0]		IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
ID [auth KY0],
MA [auth LY0]		IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
ID [auth KY0],
MA [auth LY0]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
ID [auth KY0],
MA [auth LY0]		IPR005824KOWDomain
ID [auth KY0],
MA [auth LY0]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
ID [auth KY0],
MA [auth LY0]		IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
GD [auth KW0],
KA [auth LW0]		IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
GD [auth KW0],
KA [auth LW0]		IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
FD [auth KV0],
JA [auth LV0]		IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
FD [auth KV0],
JA [auth LV0]		IPR000218Large ribosomal subunit protein uL14Family
ED [auth KU0],
IA [auth LU0]		IPR002671Large ribosomal subunit protein eL22Family
ED [auth KU0],
IA [auth LU0]		IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
CD [auth KS0],
GA [auth LS0]		IPR028877Large ribosomal subunit protein eL20Family
CD [auth KS0],
GA [auth LS0]		IPR023573Large ribosomal subunit protein eL20 domainDomain
CD [auth KS0],
GA [auth LS0]		IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
BD [auth KR0],
FA [auth LR0]		IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
BD [auth KR0],
FA [auth LR0]		IPR057259Ribosomal protein L19e, N-terminal domainDomain
BD [auth KR0],
FA [auth LR0]		IPR039547Large ribosomal subunit protein eL19Family
BD [auth KR0],
FA [auth LR0]		IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
BD [auth KR0],
FA [auth LR0]		IPR057260Ribosomal protein L19e, C-terminal domainDomain
BD [auth KR0],
FA [auth LR0]		IPR000196Large ribosomal subunit protein eL19 domainDomain
CA [auth LP0],
YC [auth KP0]		IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
CA [auth LP0],
YC [auth KP0]		IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
CA [auth LP0],
YC [auth KP0]		IPR001063Large ribosomal subunit protein uL22Family
AA [auth LO0],
WC [auth KO0]		IPR005822Large ribosomal subunit protein uL13Family
AA [auth LO0],
WC [auth KO0]		IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
AA [auth LO0],
WC [auth KO0]		IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
VC [auth KN0],
Z [auth LN0]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
VC [auth KN0],
Z [auth LN0]		IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
VC [auth KN0],
Z [auth LN0]		IPR000439Large ribosomal subunit protein eL15Family
UC [auth KMM],
Y [auth LMM]		IPR001975Large ribosomal subunit protein eL40 domainDomain
UC [auth KMM],
Y [auth LMM]		IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
UC [auth KMM],
Y [auth LMM]		IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
UC [auth KMM],
Y [auth LMM]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UC [auth KMM],
Y [auth LMM]		IPR000626Ubiquitin-like domainDomain
SC [auth KLL],
W [auth LLL]		IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
SC [auth KLL],
W [auth LLL]		IPR000077Large ribosomal subunit protein eL39Family
RC [auth KL0],
V [auth LL0]		IPR001380Large ribosomal subunit protein eL13Family
PC [auth KJ0],
T [auth LJ0]		IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
PC [auth KJ0],
T [auth LJ0]		IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
PC [auth KJ0],
T [auth LJ0]		IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
PC [auth KJ0],
T [auth LJ0]		IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
PC [auth KJ0],
T [auth LJ0]		IPR002132Large ribosomal subunit protein uL5Family
OC [auth KII],
S [auth LII]		IPR000509Large ribosomal subunit protein eL36Family
OC [auth KII],
S [auth LII]		IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
NC [auth KI0],
R [auth LI0]		IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
NC [auth KI0],
R [auth LI0]		IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
NC [auth KI0],
R [auth LI0]		IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
NC [auth KI0],
R [auth LI0]		IPR016180Large ribosomal subunit protein uL16 domainDomain
NC [auth KI0],
R [auth LI0]		IPR047873Large ribosomal subunit protein uL16Family
LC [auth KH0],
P [auth LH0]		IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
LC [auth KH0],
P [auth LH0]		IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
LC [auth KH0],
P [auth LH0]		IPR000702Large ribosomal subunit protein uL6-likeFamily
KC [auth KGG],
O [auth LGG]		IPR008195Large ribosomal subunit protein eL34Family
KC [auth KGG],
O [auth LGG]		IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
KC [auth KGG],
O [auth LGG]		IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
GC [auth KEE],
K [auth LEE]		IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GC [auth KEE],
K [auth LEE]		IPR023654Large ribosomal subunit protein eL32, archaeaFamily
GC [auth KEE],
K [auth LEE]		IPR001515Large ribosomal subunit protein eL32Family
GC [auth KEE],
K [auth LEE]		IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
FC [auth KE0],
J [auth LE0]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FC [auth KE0],
J [auth LE0]		IPR000915Large ribosomal subunit protein eL6Family