8P5D

Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averaging


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth LE0]F_UNCLASSIFIEDe8p5dLE01 A: beta barrelsX: SH3H: SH3T: SH3F: F_UNCLASSIFIEDECOD (1.6)
K [auth LEE]PF01655e8p5dLEE1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
L [auth LF0]PF00327e8p5dLF01 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
M [auth LFF]PF01247e8p5dLFF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
O [auth LGG]PF01199e8p5dLGG1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
P [auth LH0]PF00347e8p5dLH01 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
R [auth LI0]PF00252e8p5dLI01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
S [auth LII]PF01158e8p5dLII1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
T [auth LJ0]PF00281,PF00673e8p5dLJ01 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
U [auth LJJ]PF01907e8p5dLJJ1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
W [auth LLL]PF00832e8p5dLLL1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
Y [auth LMM]PF01020e8p5dLMM1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
Z [auth LN0]PF00827e8p5dLN01 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
BA [auth LOO]PF00935e8p5dLOO1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
CA [auth LP0]PF00237e8p5dLP01 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
C [auth LA0]PF00181e8p5dLA01 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
C [auth LA0]PF03947e8p5dLA02 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
DA [auth LPP]PF01780e8p5dLPP1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
EA [auth LQ0]PF17135e8p5dLQ01 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
FA [auth LR0]PF01280e8p5dLR02 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
FA [auth LR0]PF01280e8p5dLR01 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
GA [auth LS0]F_UNCLASSIFIEDe8p5dLS01 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
GA [auth LS0]PF01775e8p5dLS02 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
HA [auth LT0]PF01157e8p5dLT01 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
IA [auth LU0]PF01776e8p5dLU01 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
JA [auth LV0]PF00238e8p5dLV01 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
MA [auth LY0]PF16906e8p5dLY01 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
D [auth LAA]PF00828e8p5dLAA1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
NA [auth LZ0]PF00467,PF01777e8p5dLZ01 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
OA [auth MD1]PF05907e8p5dMD11 A: beta duplicates or obligate multimersX: MAL13P1.257-like (From Topology)H: MAL13P1.257-like (From Topology)T: MAL13P1.257-likeF: PF05907ECOD (1.6)
QA [auth SA0]PF00318e8p5dSA01 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
RA [auth SAA]PF01283e8p5dSAA1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
SA [auth SB0]PF01015e8p5dSB02 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
SA [auth SB0]PF01015e8p5dSB01 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
TA [auth SBB]PF01667e8p5dSBB1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
UA [auth SC0]PF03719e8p5dSC01 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
UA [auth SC0]F_UNCLASSIFIEDe8p5dSC03 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: F_UNCLASSIFIEDECOD (1.6)
UA [auth SC0]PF00333e8p5dSC02 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
VA [auth SCC]PF01200e8p5dSCC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
WA [auth SD0]PF00189e8p5dSD02 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
WA [auth SD0]F_UNCLASSIFIEDe8p5dSD01 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: F_UNCLASSIFIEDECOD (1.6)
E [auth LB0]PF00297e8p5dLB01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
XA [auth SDD]PF00253e8p5dSDD1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
YA [auth SE0]PF00900e8p5dSE03 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
YA [auth SE0]PF16121e8p5dSE02 A: beta barrelsX: SH3H: SH3T: SH3F: PF16121ECOD (1.6)
YA [auth SE0]PF08071e8p5dSE01 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF08071ECOD (1.6)
ZA [auth SEE]PF04758e8p5dSEE1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
AB [auth SF0]PF00177e8p5dSF01 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
BB [auth SFF]PF01599e8p5dSFF1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
CB [auth SG0]PF01092e8p5dSG01 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
DB [auth SGG]PF00400e8p5dSGG1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
EB [auth SH0]F_UNCLASSIFIEDe8p5dSH01 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: F_UNCLASSIFIEDECOD (1.6)
FB [auth SI0]PF01201e8p5dSI01 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
GB [auth SJ0]PF01479e8p5dSJ01 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF01479ECOD (1.6)
HB [auth SK0]PF03501e8p5dSK01 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
IB [auth SL0]PF00366,PF16205e8p5dSL01 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
JB [auth SM0]PF01248e8p5dSM01 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
KB [auth SN0]PF08069e8p5dSN01 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
KB [auth SN0]F_UNCLASSIFIEDe8p5dSN02 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: F_UNCLASSIFIEDECOD (1.6)
LB [auth SO0]PF00411e8p5dSO01 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
MB [auth SP0]PF00203e8p5dSP01 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
NB [auth SQ0]PF00380e8p5dSQ01 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
OB [auth SR0]PF00833e8p5dSR01 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
PB [auth SS0]PF00416e8p5dSS01 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
QB [auth ST0]PF01090e8p5dST01 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
G [auth LCC]PF01248e8p5dLCC1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
SB [auth SV0]PF01249e8p5dSV01 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
TB [auth SW0]PF00410e8p5dSW02 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
TB [auth SW0]PF00410e8p5dSW01 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
UB [auth SX0]PF00164e8p5dSX01 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
WB [auth SZ0]PF03297e8p5dSZ01 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
H [auth LD0]PF14204,PF17144e8p5dLD01 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
I [auth LDD]PF01198e8p5dLDD1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
K [auth LEE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
L [auth LF0]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
M [auth LFF]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
N [auth LG0]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
O [auth LGG]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
P [auth LH0]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
Q [auth LHH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
R [auth LI0]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
S [auth LII]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
T [auth LJ0]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
T [auth LJ0]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
V [auth LL0]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
W [auth LLL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
Y [auth LMM]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
Z [auth LN0]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
AA [auth LO0]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
BA [auth LOO]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
CA [auth LP0]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
C [auth LA0]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
DA [auth LPP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
EA [auth LQ0]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
FA [auth LR0]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
GA [auth LS0]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
HA [auth LT0]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
IA [auth LU0]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
JA [auth LV0]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
KA [auth LW0]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
LA [auth LX0]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
MA [auth LY0]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
MA [auth LY0]PF00467KOW motif (KOW)KOW motif- Family
NA [auth LZ0]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
OA [auth MD1]PF05907CXXC motif containing zinc binding protein, eukaryotic (CXXC_Zn-b_euk)CXXC motif containing zinc binding protein, eukaryotic- Family
QA [auth SA0]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
RA [auth SAA]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
UA [auth SC0]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
UA [auth SC0]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
WA [auth SD0]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
E [auth LB0]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
XA [auth SDD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
YA [auth SE0]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
YA [auth SE0]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
YA [auth SE0]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
AB [auth SF0]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
BB [auth SFF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
CB [auth SG0]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
DB [auth SGG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
EB [auth SH0]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
FB [auth SI0]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
GB [auth SJ0]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
F [auth LC0]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
HB [auth SK0]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
IB [auth SL0]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
IB [auth SL0]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
JB [auth SM0]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
KB [auth SN0]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
LB [auth SO0]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
MB [auth SP0]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
NB [auth SQ0]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
PB [auth SS0]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
QB [auth ST0]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
G [auth LCC]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
RB [auth SU0]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
SB [auth SV0]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
TB [auth SW0]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
VB [auth SY0]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
WB [auth SZ0]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
H [auth LD0]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
H [auth LD0]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
I [auth LDD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth L50]RNA 28S---
J [auth LE0]60S ribosomal protein L6
K [auth LEE]60S ribosomal protein L32
L [auth LF0]60S ribosomal protein L7- -
M [auth LFF]60S ribosomal protein L35a
N [auth LG0]60S ribosomal protein L8 -
O [auth LGG]Ribosomal protein L34
P [auth LH0]60S ribosomal protein L9
Q [auth LHH]Ribosomal L29 protein (Fragment),Ribosomal L29 protein (Fragment),Ribosomal L29 protein (Fragment),Ribosomal L29 protein
R [auth LI0]S60 ribosomal protein L10
S [auth LII]60S ribosomal protein L36
B [auth L70]RNA 5S---
T [auth LJ0]60S ribosomal protein L11
U [auth LJJ]eL37---
V [auth LL0]60S ribosomal protein L13
W [auth LLL]60S ribosomal protein L39
X [auth LM0]Transposase- - -
Y [auth LMM]Ubiquitin
Z [auth LN0]Ribosomal protein L15
AA [auth LO0]Ribosomal protein L13A
BA [auth LOO]60S ribosomal protein L44
CA [auth LP0]60S ribosomal protein L17
C [auth LA0]60S ribosomal protein L8
DA [auth LPP]60S ribosomal protein L37a
EA [auth LQ0]60S ribosomal protein L18
FA [auth LR0]60S ribosomal protein L19
GA [auth LS0]60S ribosomal protein L20
HA [auth LT0]60s ribosomal protein L21
IA [auth LU0]60S ribosomal protein L22
JA [auth LV0]Ribosomal protein L23
KA [auth LW0]Ribosomal protein L24E- -
LA [auth LX0]60S ribosomal protein L23a
MA [auth LY0]60S ribosomal protein L26
D [auth LAA]uL15---
NA [auth LZ0]60S ribosomal protein L27
OA [auth MD1]DNL-type domain-containing protein- - -
PA [auth S60]RNA 16S---
QA [auth SA0]40S ribosomal protein S0
RA [auth SAA]40S ribosomal protein S26
SA [auth SB0]eS1---
TA [auth SBB]eS27---
UA [auth SC0]40S ribosomal protein S2
VA [auth SCC]eS28---
WA [auth SD0]40S ribosomal protein S3
E [auth LB0]60S ribosomal protein L3
XA [auth SDD]40S ribosomal protein S29
YA [auth SE0]40S ribosomal protein S4
ZA [auth SEE]eS30---
AB [auth SF0]40S ribosomal protein S5
BB [auth SFF]Ubiquitin/40s ribosomal protein S27a fusion
CB [auth SG0]40S ribosomal protein S6
DB [auth SGG]Guanine nucleotide binding protein beta subunit - -
EB [auth SH0]40S ribosomal protein S7
FB [auth SI0]40S ribosomal protein S8
GB [auth SJ0]40S ribosomal protein S9
F [auth LC0]60S ribosomal protein L4
HB [auth SK0]40S ribosomal protein S10- -
IB [auth SL0]40S ribosomal protein S11
JB [auth SM0]40S ribosomal protein S12- -
KB [auth SN0]40S ribosomal protein S13
LB [auth SO0]40S ribosomal protein S14
MB [auth SP0]Ribosomal protein S19
NB [auth SQ0]40S ribosomal protein S16
OB [auth SR0]eS17---
PB [auth SS0]40S ribosomal protein S18
QB [auth ST0]40S Ribosomal protein S19
G [auth LCC]60S ribosomal protein L3 -
RB [auth SU0]40S ribosomal protein S20- -
SB [auth SV0]Ribosomal protein S21E
TB [auth SW0]40S ribosomal protein S15A
UB [auth SX0]uS12---
VB [auth SY0]40s ribosomal protein s24
WB [auth SZ0]40S ribosomal protein S25- -
H [auth LD0]60S ribosomal protein L5
I [auth LDD]60S ribosomal protein L31

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth LE0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
J [auth LE0]IPR000915Large ribosomal subunit protein eL6Family
K [auth LEE]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
K [auth LEE]IPR001515Large ribosomal subunit protein eL32Family
K [auth LEE]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
L [auth LF0]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
L [auth LF0]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
L [auth LF0]IPR039699Large ribosomal subunit protein uL30Family
L [auth LF0]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
L [auth LF0]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
M [auth LFF]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
M [auth LFF]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
M [auth LFF]IPR001780Large ribosomal subunit protein eL33Family
N [auth LG0]IPR001921Large ribosomal subunit protein eL8Family
N [auth LG0]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
N [auth LG0]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
N [auth LG0]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
O [auth LGG]IPR008195Large ribosomal subunit protein eL34Family
O [auth LGG]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
P [auth LH0]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
P [auth LH0]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
P [auth LH0]IPR000702Large ribosomal subunit protein uL6-likeFamily
Q [auth LHH]IPR001854Large ribosomal subunit protein uL29Family
Q [auth LHH]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
R [auth LI0]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
R [auth LI0]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
R [auth LI0]IPR016180Large ribosomal subunit protein uL16 domainDomain
R [auth LI0]IPR047873Large ribosomal subunit protein uL16Family
R [auth LI0]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
S [auth LII]IPR000509Large ribosomal subunit protein eL36Family
S [auth LII]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
T [auth LJ0]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
T [auth LJ0]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
T [auth LJ0]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
T [auth LJ0]IPR002132Large ribosomal subunit protein uL5Family
V [auth LL0]IPR001380Large ribosomal subunit protein eL13Family
W [auth LLL]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
W [auth LLL]IPR000077Large ribosomal subunit protein eL39Family
Y [auth LMM]IPR001975Large ribosomal subunit protein eL40 domainDomain
Y [auth LMM]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
Y [auth LMM]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
Y [auth LMM]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Y [auth LMM]IPR000626Ubiquitin-like domainDomain
Z [auth LN0]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth LN0]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
Z [auth LN0]IPR000439Large ribosomal subunit protein eL15Family
AA [auth LO0]IPR005822Large ribosomal subunit protein uL13Family
AA [auth LO0]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
AA [auth LO0]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
BA [auth LOO]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth LOO]IPR000552Large ribosomal subunit protein eL42Family
CA [auth LP0]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
CA [auth LP0]IPR001063Large ribosomal subunit protein uL22Family
CA [auth LP0]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
C [auth LA0]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth LA0]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth LA0]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth LA0]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth LA0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth LA0]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth LA0]IPR002171Large ribosomal subunit protein uL2Family
DA [auth LPP]IPR002674Large ribosomal subunit protein eL43Family
DA [auth LPP]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth LPP]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
EA [auth LQ0]IPR021131Large ribosomal subunit protein uL15/eL18Domain
EA [auth LQ0]IPR000039Large ribosomal subunit protein eL18Family
EA [auth LQ0]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
FA [auth LR0]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
FA [auth LR0]IPR039547Large ribosomal subunit protein eL19Family
FA [auth LR0]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
FA [auth LR0]IPR000196Large ribosomal subunit protein eL19 domainDomain
GA [auth LS0]IPR028877Large ribosomal subunit protein eL20Family
GA [auth LS0]IPR023573Large ribosomal subunit protein eL20 domainDomain
GA [auth LS0]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
HA [auth LT0]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
HA [auth LT0]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
HA [auth LT0]IPR001147Large ribosomal subunit protein eL21Family
HA [auth LT0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IA [auth LU0]IPR002671Large ribosomal subunit protein eL22Family
IA [auth LU0]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
JA [auth LV0]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
JA [auth LV0]IPR000218Large ribosomal subunit protein uL14Family
KA [auth LW0]IPR000988Large ribosomal subunit protein eL24-relatedFamily
KA [auth LW0]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
LA [auth LX0]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
LA [auth LX0]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
LA [auth LX0]IPR013025Large ribosomal subunit protein uL23-likeFamily
MA [auth LY0]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
MA [auth LY0]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth LY0]IPR005824KOWDomain
MA [auth LY0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth LY0]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
MA [auth LY0]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
NA [auth LZ0]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
NA [auth LZ0]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth LZ0]IPR001141Large ribosomal subunit protein eL27Family
OA [auth MD1]IPR008584CXXC motif containing zinc binding protein, eukaryoticFamily
QA [auth SA0]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
QA [auth SA0]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
QA [auth SA0]IPR001865Small ribosomal subunit protein uS2Family
RA [auth SAA]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
RA [auth SAA]IPR000892Small ribosomal subunit protein eS26Family
UA [auth SC0]IPR000851Small ribosomal subunit protein uS5Family
UA [auth SC0]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
UA [auth SC0]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
UA [auth SC0]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
UA [auth SC0]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
UA [auth SC0]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
WA [auth SD0]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
WA [auth SD0]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
WA [auth SD0]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
WA [auth SD0]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
E [auth LB0]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth LB0]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth LB0]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
E [auth LB0]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth LB0]IPR000597Large ribosomal subunit protein uL3Family
XA [auth SDD]IPR001209Small ribosomal subunit protein uS14Family
XA [auth SDD]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
XA [auth SDD]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
XA [auth SDD]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
YA [auth SE0]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
YA [auth SE0]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
YA [auth SE0]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
YA [auth SE0]IPR002942RNA-binding S4 domainDomain
YA [auth SE0]IPR013845Small ribosomal subunit protein eS4, central regionDomain
YA [auth SE0]IPR000876Small ribosomal subunit protein eS4Family
YA [auth SE0]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth SE0]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
YA [auth SE0]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
YA [auth SE0]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
AB [auth SF0]IPR000235Small ribosomal subunit protein uS7Family
AB [auth SF0]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
AB [auth SF0]IPR023798Small ribosomal subunit protein uS7 domainDomain
AB [auth SF0]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
BB [auth SFF]IPR019954Ubiquitin conserved siteConserved Site
BB [auth SFF]IPR000626Ubiquitin-like domainDomain
BB [auth SFF]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
BB [auth SFF]IPR002906Small ribosomal subunit protein eS31Domain
BB [auth SFF]IPR019956Ubiquitin domainDomain
BB [auth SFF]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
BB [auth SFF]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CB [auth SG0]IPR001377Small ribosomal subunit protein eS6Family
DB [auth SGG]IPR045223Small ribosomal subunit protein RACK1-likeFamily
DB [auth SGG]IPR001680WD40 repeatRepeat
DB [auth SGG]IPR019775WD40 repeat, conserved siteConserved Site
DB [auth SGG]IPR020472G-protein beta WD-40 repeatRepeat
DB [auth SGG]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
DB [auth SGG]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
EB [auth SH0]IPR000554Small ribosomal subunit protein eS7Family
FB [auth SI0]IPR001047Small ribosomal subunit protein eS8Family
FB [auth SI0]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
GB [auth SJ0]IPR002942RNA-binding S4 domainDomain
GB [auth SJ0]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
GB [auth SJ0]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
GB [auth SJ0]IPR022801Small ribosomal subunit protein uS4Family
F [auth LC0]IPR002136Large ribosomal subunit protein uL4Family
F [auth LC0]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
F [auth LC0]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
HB [auth SK0]IPR037447Small ribosomal subunit protein eS10Family
HB [auth SK0]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
HB [auth SK0]IPR005326Plectin/eS10, N-terminalDomain
IB [auth SL0]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IB [auth SL0]IPR000266Small ribosomal subunit protein uS17Family
IB [auth SL0]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
JB [auth SM0]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
JB [auth SM0]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
KB [auth SN0]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
KB [auth SN0]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
KB [auth SN0]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
KB [auth SN0]IPR000589Small ribosomal subunit protein uS15Family
LB [auth SO0]IPR001971Small ribosomal subunit protein uS11Family
LB [auth SO0]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
MB [auth SP0]IPR002222Small ribosomal subunit protein uS19Family
MB [auth SP0]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
MB [auth SP0]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
NB [auth SQ0]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NB [auth SQ0]IPR000754Small ribosomal subunit protein uS9Family
NB [auth SQ0]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PB [auth SS0]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
PB [auth SS0]IPR001892Small ribosomal subunit protein uS13Family
PB [auth SS0]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
QB [auth ST0]IPR001266Small ribosomal subunit protein eS19Family
QB [auth ST0]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
QB [auth ST0]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
G [auth LCC]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
G [auth LCC]IPR039109Large ribosomal subunit protein eL30-likeFamily
G [auth LCC]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
RB [auth SU0]IPR027486Small ribosomal subunit protein uS10 domainDomain
RB [auth SU0]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
SB [auth SV0]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
SB [auth SV0]IPR001931Small ribosomal subunit protein eS21Family
TB [auth SW0]IPR000630Small ribosomal subunit protein uS8Family
TB [auth SW0]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
VB [auth SY0]IPR001976Small ribosomal subunit protein eS24Family
VB [auth SY0]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
WB [auth SZ0]IPR004977Small ribosomal subunit protein eS25Family
H [auth LD0]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
H [auth LD0]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
I [auth LDD]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
I [auth LDD]IPR000054Large ribosomal subunit protein eL31Family