CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : PARENTAL STRAIN
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| FC [auth Bi] | SCOP2B Superfamily | Ribosomal protein L32e | 8102449 | 3000982 | SCOP2B (2022-06-29) |
| EC [auth BZ] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8076748 | 3000334 | SCOP2B (2022-06-29) |
| AC [auth Bw] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8052935 | 3001378 | SCOP2B (2022-06-29) |
| YB [auth BW] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072052 | 3000433 | SCOP2B (2022-06-29) |
| XB [auth Bv] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8053104 | 3000334 | SCOP2B (2022-06-29) |
| WB [auth BV] | SCOP2B Superfamily | 60S Ribosomal protein L22e | 8053057 | 3002158 | SCOP2B (2022-06-29) |
| VB [auth Bu] | SCOP2B Superfamily | Translational machinery components | 8052881 | 3000571 | SCOP2B (2022-06-29) |
| SB [auth BT] | SCOP2B Superfamily | Ribosomal protein L19 (L19e) | 8106296 | 3000890 | SCOP2B (2022-06-29) |
| RB [auth Bs] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8098578 | 3001320 | SCOP2B (2022-06-29) |
| PB [auth Br] | SCOP2B Superfamily | 60S ribosomal protein L4 C-terminal domain-like | 8052837 | 3002143 | SCOP2B (2022-06-29) |
| PB [auth Br] | SCOP2B Superfamily | Ribosomal protein L4 | 8052838 | 3001146 | SCOP2B (2022-06-29) |
| OB [auth BR] | SCOP2B Superfamily | Ribosomal protein L22 | 8076714 | 3001078 | SCOP2B (2022-06-29) |
| NB [auth BQ] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8082491 | 3000210 | SCOP2B (2022-06-29) |
| MB [auth Bq] | SCOP2B Superfamily | Ribosomal protein L39e | 8099554 | 3001756 | SCOP2B (2022-06-29) |
| LB [auth Bp] | SCOP2B Superfamily | Ribosomal L38e protein-like | 8053565 | 3002206 | SCOP2B (2022-06-29) |
| KB [auth Bo] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8101617 | 3001320 | SCOP2B (2022-06-29) |
| GB [auth Bm] | SCOP2B Superfamily | Ribosomal protein L36e | 8053121 | 3002161 | SCOP2B (2022-06-29) |
| FB [auth Bl] | SCOP2B Superfamily | Translational proteins | 8099564 | 3000811 | SCOP2B (2022-06-29) |
| EB [auth BL] | SCOP2B Superfamily | RL5-like | 8077507 | 3001709 | SCOP2B (2022-06-29) |
| CB [auth BK] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8099388 | 3000884 | SCOP2B (2022-06-29) |
| AB [auth BI] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8095971 | 3001045 | SCOP2B (2022-06-29) |
| ZA [auth Bf] | SCOP2B Superfamily | Translational proteins | 8099560 | 3000811 | SCOP2B (2022-06-29) |
| VA [auth Bd] | SCOP2B Superfamily | Ribosomal protein L29e | 8053040 | 3002157 | SCOP2B (2022-06-29) |
| TA [auth Bb] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8099386 | 3001045 | SCOP2B (2022-06-29) |
| SA [auth Ba] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8053048 | 3000334 | SCOP2B (2022-06-29) |
| QA [auth AG] | SCOP2B Superfamily | Homeodomain-like | 8052952 | 3000001 | SCOP2B (2022-06-29) |
| QA [auth AG] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8052953 | 3001284 | SCOP2B (2022-06-29) |
| PA [auth AE] | SCOP2B Superfamily | Ribosomal S17 N-terminal domain-like | 8052727 | 3002138 | SCOP2B (2022-06-29) |
| PA [auth AE] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052729 | 3000135 | SCOP2B (2022-06-29) |
| OA [auth AD] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8055706 | 3000034 | SCOP2B (2022-06-29) |
| NA [auth AC] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8063812 | 3001397 | SCOP2B (2022-06-29) |
| KA [auth A5] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8053073 | 3000433 | SCOP2B (2022-06-29) |
| IA [auth A3] | SCOP2B Superfamily | GS N-terminal domain-like | 8053164 | 3000408 | SCOP2B (2022-06-29) |
| HA [auth A2] | SCOP2B Superfamily | Ribosomal protein S7 | 8066015 | 3000799 | SCOP2B (2022-06-29) |
| GA [auth A1] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052768 | 3000135 | SCOP2B (2022-06-29) |
| GA [auth A1] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8052769 | 3000334 | SCOP2B (2022-06-29) |
| GA [auth A1] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8052767 | 3001473 | SCOP2B (2022-06-29) |
| FA [auth A0] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8053205 | 3002166 | SCOP2B (2022-06-29) |
| DA [auth AZ] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8063436 | 3000135 | SCOP2B (2022-06-29) |
| CA [auth AY] | SCOP2B Superfamily | Ribosomal protein S30e-like | 8053450 | 3002190 | SCOP2B (2022-06-29) |
| Z [auth AV] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8053142 | 3000068 | SCOP2B (2022-06-29) |
| Y [auth AU] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8090998 | 3000034 | SCOP2B (2022-06-29) |
| V [auth AR] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8053133 | 3000068 | SCOP2B (2022-06-29) |
| S [auth AM] | SCOP2B Superfamily | S13-like H2TH domain | 8101619 | 3000053 | SCOP2B (2022-06-29) |
| Q [auth AJ] | SCOP2B Superfamily | Ribosomal protein S8 | 8081973 | 3000709 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| HC [auth AF] | Cys_Met_Meta_PP | e8ovaAF1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| GC [auth BP] | Cys_Met_Meta_PP | e8ovaBP1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| FC [auth Bi] | Cys_Met_Meta_PP | e8ovaBi1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| EC [auth BZ] | Cys_Met_Meta_PP | e8ovaBZ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| DC [auth By] | Cys_Met_Meta_PP | e8ovaBy1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| CC [auth BY] | Cys_Met_Meta_PP | e8ovaBY1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| BC [auth Bx] | Cys_Met_Meta_PP | e8ovaBx1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| AC [auth Bw] | Cys_Met_Meta_PP | e8ovaBw1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| ZB [auth BX] | Cys_Met_Meta_PP | e8ovaBX1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| YB [auth BW] | Cys_Met_Meta_PP | e8ovaBW1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| XB [auth Bv] | Cys_Met_Meta_PP | e8ovaBv1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| WB [auth BV] | Cys_Met_Meta_PP | e8ovaBV1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| VB [auth Bu] | Cys_Met_Meta_PP | e8ovaBu1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| UB [auth BU] | Cys_Met_Meta_PP | e8ovaBU1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| TB [auth Bt] | Cys_Met_Meta_PP | e8ovaBt1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| SB [auth BT] | Cys_Met_Meta_PP | e8ovaBT1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| RB [auth Bs] | Cys_Met_Meta_PP | e8ovaBs1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| QB [auth BS] | Cys_Met_Meta_PP | e8ovaBS1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| OB [auth BR] | Cys_Met_Meta_PP | e8ovaBR1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| NB [auth BQ] | Cys_Met_Meta_PP | e8ovaBQ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| MB [auth Bq] | Cys_Met_Meta_PP | e8ovaBq1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| LB [auth Bp] | Cys_Met_Meta_PP | e8ovaBp1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| KB [auth Bo] | Cys_Met_Meta_PP | e8ovaBo1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| JB [auth BO] | Cys_Met_Meta_PP | e8ovaBO1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| IB [auth Bn] | Cys_Met_Meta_PP | e8ovaBn1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| HB [auth BN] | Cys_Met_Meta_PP | e8ovaBN1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| GB [auth Bm] | Cys_Met_Meta_PP | e8ovaBm1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| FB [auth Bl] | Cys_Met_Meta_PP | e8ovaBl1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| EB [auth BL] | Cys_Met_Meta_PP | e8ovaBL1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| DB [auth Bk] | Cys_Met_Meta_PP | e8ovaBk1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| CB [auth BK] | Cys_Met_Meta_PP | e8ovaBK1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| BB [auth Bj] | Cys_Met_Meta_PP | e8ovaBj1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| AB [auth BI] | Cys_Met_Meta_PP | e8ovaBI1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| ZA [auth Bf] | Cys_Met_Meta_PP | e8ovaBf1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| YA [auth Bg] | Cys_Met_Meta_PP | e8ovaBg1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| XA [auth Bz] | Cys_Met_Meta_PP | e8ovaBz1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| WA [auth Be] | Cys_Met_Meta_PP | e8ovaBe1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| VA [auth Bd] | Cys_Met_Meta_PP | e8ovaBd1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| UA [auth Bc] | Cys_Met_Meta_PP | e8ovaBc1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| TA [auth Bb] | Cys_Met_Meta_PP | e8ovaBb1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| SA [auth Ba] | Cys_Met_Meta_PP | e8ovaBa1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| QA [auth AG] | Cys_Met_Meta_PP | e8ovaAG1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| PA [auth AE] | Cys_Met_Meta_PP | e8ovaAE1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| OA [auth AD] | Cys_Met_Meta_PP | e8ovaAD1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| NA [auth AC] | Cys_Met_Meta_PP | e8ovaAC1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| MA [auth A7] | Cys_Met_Meta_PP | e8ovaA71 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| LA [auth A6] | Cys_Met_Meta_PP | e8ovaA61 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| KA [auth A5] | Cys_Met_Meta_PP | e8ovaA51 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| JA [auth A4] | Cys_Met_Meta_PP | e8ovaA41 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| IA [auth A3] | Cys_Met_Meta_PP | e8ovaA31 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| HA [auth A2] | Cys_Met_Meta_PP | e8ovaA21 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| GA [auth A1] | Cys_Met_Meta_PP | e8ovaA11 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| FA [auth A0] | Cys_Met_Meta_PP | e8ovaA01 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| EA [auth AL] | Cys_Met_Meta_PP | e8ovaAL1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| DA [auth AZ] | Cys_Met_Meta_PP | e8ovaAZ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| CA [auth AY] | Cys_Met_Meta_PP | e8ovaAY1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| BA [auth AX] | Cys_Met_Meta_PP | e8ovaAX1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| AA [auth AW] | Cys_Met_Meta_PP | e8ovaAW1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| Z [auth AV] | Cys_Met_Meta_PP | e8ovaAV1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| Y [auth AU] | Cys_Met_Meta_PP | e8ovaAU1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| X [auth AT] | Cys_Met_Meta_PP | e8ovaAT1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| W [auth AS] | Cys_Met_Meta_PP | e8ovaAS1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| V [auth AR] | Cys_Met_Meta_PP | e8ovaAR1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| U [auth AP] | Cys_Met_Meta_PP | e8ovaAP1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| T [auth AO] | Cys_Met_Meta_PP | e8ovaAO1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| S [auth AM] | Cys_Met_Meta_PP | e8ovaAM1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| R [auth AK] | Cys_Met_Meta_PP | e8ovaAK1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| Q [auth AJ] | Cys_Met_Meta_PP | e8ovaAJ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| P [auth AI] | Cys_Met_Meta_PP | e8ovaAI1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| O [auth AH] | Cys_Met_Meta_PP | e8ovaAH1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| N [auth Az] | Cys_Met_Meta_PP | e8ovaAz1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| M [auth A9] | Cys_Met_Meta_PP | e8ovaA91 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| L [auth A8] | Cys_Met_Meta_PP | e8ovaA81 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
| K [auth AQ] | Cys_Met_Meta_PP | e8ovaAQ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cys_Met_Meta_PP | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth BC] | PF01778 | Ribosomal L28e protein family (Ribosomal_L28e) | Ribosomal L28e protein family | - | Family |
| GC [auth BP] | PF01781 | Ribosomal L38e protein family (Ribosomal_L38e) | Ribosomal L38e protein family | - | Family |
| GC [auth BP] | PF01929 | Ribosomal protein L14 (Ribosomal_L14e) | Ribosomal protein L14 | - | Family |
| GC [auth BP] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| EC [auth BZ] | PF16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26) | Ribosomal proteins L26 eukaryotic, L24P archaeal | - | Family |
| EC [auth BZ] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| CC [auth BY] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| CC [auth BY] | PF01246 | Ribosomal protein L24e (Ribosomal_L24e) | Ribosomal protein L24e | Domain | |
| H [auth BD] | PF01779 | Ribosomal L29e protein family (Ribosomal_L29e) | Ribosomal L29e protein family | - | Family |
| ZB [auth BX] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| YB [auth BW] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| YB [auth BW] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| WB [auth BV] | PF01776 | Ribosomal L22e protein family (Ribosomal_L22e) | Ribosomal L22e protein family | - | Family |
| WB [auth BV] | PF01159 | Ribosomal protein L6e (Ribosomal_L6e) | Ribosomal protein L6e | - | Family |
| UB [auth BU] | PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family |
| SB [auth BT] | PF01280 | Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e) | Ribosomal protein L19e, N-terminal domain | This domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. | Domain |
| SB [auth BT] | PF25476 | Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C) | Ribosomal protein L19e, C-terminal domain | This domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. | Domain |
| G [auth BE] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| G [auth BE] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| QB [auth BS] | PF01775 | Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A) | Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A | This family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. | Domain |
| OB [auth BR] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| OB [auth BR] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| NB [auth BQ] | PF00832 | Ribosomal L39 protein (Ribosomal_L39) | Ribosomal L39 protein | - | Family |
| NB [auth BQ] | PF00827 | Ribosomal L15 (Ribosomal_L15e) | Ribosomal L15 | - | Family |
| JB [auth BO] | PF01780 | Ribosomal L37ae protein family (Ribosomal_L37ae) | Ribosomal L37ae protein family | - | Family |
| JB [auth BO] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| HB [auth BN] | PF01294 | Ribosomal protein L13e (Ribosomal_L13e) | Ribosomal protein L13e | - | Family |
| HB [auth BN] | PF01907 | Ribosomal protein L37e (Ribosomal_L37e) | Ribosomal protein L37e | - | Family |
| EB [auth BL] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| EB [auth BL] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| EB [auth BL] | PF01247 | Ribosomal protein L35Ae (Ribosomal_L35Ae) | Ribosomal protein L35Ae | This entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. | Domain |
| CB [auth BK] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| CB [auth BK] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| AB [auth BI] | PF17135 | Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18) | Ribosomal protein 60S L18 and 50S L18e | - | Family |
| AB [auth BI] | PF01655 | Ribosomal protein L32 (Ribosomal_L32e) | Ribosomal protein L32 | - | Family |
| QA [auth AG] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| PA [auth AE] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| PA [auth AE] | PF16205 | Ribosomal_S17 N-terminal (Ribosomal_S17_N) | Ribosomal_S17 N-terminal | - | Family |
| OA [auth AD] | PF03501 | Plectin/S10 domain (S10_plectin) | Plectin/S10 domain | This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. | Domain |
| NA [auth AC] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| D [auth BH] | PF01198 | Ribosomal protein L31e (Ribosomal_L31e) | Ribosomal protein L31e | - | Family |
| KA [auth A5] | PF01201 | Ribosomal protein S8e (Ribosomal_S8e) | Ribosomal protein S8e | - | Family |
| JA [auth A4] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| IA [auth A3] | PF01092 | Ribosomal protein S6e (Ribosomal_S6e) | Ribosomal protein S6e | - | Family |
| HA [auth A2] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| GA [auth A1] | PF00900 | Ribosomal family S4e (Ribosomal_S4e) | Ribosomal family S4e | - | Family |
| GA [auth A1] | PF16121 | 40S ribosomal protein S4 C-terminus (40S_S4_C) | 40S ribosomal protein S4 C-terminus | - | Family |
| GA [auth A1] | PF08071 | RS4NT (NUC023) domain (RS4NT) | RS4NT (NUC023) domain | This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. | Domain |
| GA [auth A1] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| GA [auth A1] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| C [auth BB] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| BA [auth AX] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| BA [auth AX] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| AA [auth AW] | PF01667 | Ribosomal protein S27 (Ribosomal_S27e) | Ribosomal protein S27 | - | Family |
| X [auth AT] | PF01282 | Ribosomal protein S24e (Ribosomal_S24e) | Ribosomal protein S24e | - | Family |
| W [auth AS] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| V [auth AR] | PF01249 | Ribosomal protein S21e (Ribosomal_S21e) | Ribosomal protein S21e | - | Family |
| U [auth AP] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| U [auth AP] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| T [auth AO] | PF01090 | Ribosomal protein S19e (Ribosomal_S19e) | Ribosomal protein S19e | - | Family |
| S [auth AM] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| R [auth AK] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| Q [auth AJ] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| P [auth AI] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| M [auth A9] | PF01599 | Ribosomal protein S27a (Ribosomal_S27) | Ribosomal protein S27a | This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ... | Domain |
| A [auth BA] | PF01777 | Ribosomal L27e protein family (Ribosomal_L27e) | Ribosomal L27e protein family | - | Family |
| A [auth BA] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |














