8ONZ | pdb_00008onz

Chaetomium thermophilum Methionine Aminopeptidase 2 at the 80S ribosome

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E [auth Lk]	SCOP2B Superfamily	Ribosomal L38e protein-like	8106202	3002206	SCOP2B (2022-06-29)
C [auth LY]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8106166	3000334	SCOP2B (2022-06-29)
A [auth LR]	SCOP2B Superfamily	Ribosomal protein L19 (L19e)	8106186	3000890	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
H [auth A]	PF00557	Metallopeptidase family M24 (Peptidase_M24)	Metallopeptidase family M24	This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module [3].	Domain
C [auth LY]	PF16906	Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)	Ribosomal proteins L26 eukaryotic, L24P archaeal	-	Family
C [auth LY]	PF00467	KOW motif (KOW)	KOW motif	-	Family
B [auth LX]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
A [auth LR]	PF01280	Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)	Ribosomal protein L19e, N-terminal domain	This domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth Lh]	dolichyl-diphosphooligosaccharide--protein glycotransferase	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding oligosaccharyl transferase activity glycosyltransferase activity dolichyl-diphosphooligosaccharide-protein glycotransferase activity transferase activity hexosyltransferase activity catalytic activity	macromolecule modification metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process carbohydrate derivative biosynthetic process glycoprotein biosynthetic process carbohydrate derivative metabolic process glycoprotein metabolic process protein N-linked glycosylation macromolecule biosynthetic process macromolecule modification metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process carbohydrate derivative biosynthetic process glycoprotein biosynthetic process carbohydrate derivative metabolic process glycoprotein metabolic process protein N-linked glycosylation macromolecule biosynthetic process protein N-linked glycosylation via asparagine biosynthetic process translation gene expression protein biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex organelle subcompartment oligosaccharyltransferase complex membrane membrane protein complex intracellular membrane-bounded organelle transferase complex endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure membrane-bounded organelle protein-containing complex intracellular anatomical structure catalytic complex organelle subcompartment oligosaccharyltransferase complex membrane membrane protein complex intracellular membrane-bounded organelle transferase complex endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum protein-containing complex endoplasmic reticulum membrane preribosome ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
H [auth A]	Methionine aminopeptidase 2	peptidase activity catalytic activity, acting on a protein initiator methionyl aminopeptidase activity aminopeptidase activity hydrolase activity exopeptidase activity catalytic activity metallopeptidase activity metalloaminopeptidase activity metalloexopeptidase activity cation binding ion binding binding metal ion binding peptidase activity catalytic activity, acting on a protein initiator methionyl aminopeptidase activity aminopeptidase activity hydrolase activity exopeptidase activity catalytic activity metallopeptidase activity metalloaminopeptidase activity metalloexopeptidase activity cation binding ion binding binding metal ion binding small molecule binding	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm
G [auth 2]	5.8S rRNA	-	-	-
F [auth 1]	28S rRNA	-	-	-
E [auth Lk]	60S ribosomal protein L38-like protein	structural molecule activity structural constituent of ribosome	cellular component organization cellular component biogenesis ribonucleoprotein complex biogenesis protein-RNA complex organization cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis protein-RNA complex assembly biosynthetic process metabolic process primary metabolic process protein metabolic process cellular component organization cellular component biogenesis ribonucleoprotein complex biogenesis protein-RNA complex organization cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis protein-RNA complex assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
C [auth LY]	60S ribosomal protein L26-like protein	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
B [auth LX]	60S ribosomal protein L25-like protein	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
A [auth LR]	Ribosomal protein L19	enzyme regulator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity protein kinase activator activity protein kinase regulator activity kinase regulator activity structural molecule activity structural constituent of ribosome	cellular response to stimulus response to nutrient levels response to stimulus cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation cellular process response to starvation regulation of cellular process protein biosynthetic process regulation of primary metabolic process cellular response to stimulus response to nutrient levels response to stimulus cellular response to amino acid starvation cellular response to starvation cellular response to nutrient levels cellular response to stress response to stress response to amino acid starvation cellular process response to starvation regulation of cellular process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression translational initiation protein metabolic process regulation of biosynthetic process regulation of biological process regulation of translational initiation regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process translation gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of translation regulation of cytoplasmic translational initiation cytoplasmic translation cytoplasmic translational initiation metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of cytoplasmic translation regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth Lh]	IPR003674	Oligosaccharyl transferase, STT3 subunit	Family
D [auth Lh]	IPR048307	Oligosaccharyl transferase STT3, N-terminal domain	Domain
D [auth Lh]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
D [auth Lh]	IPR001854	Large ribosomal subunit protein uL29	Family
D [auth Lh]	IPR048999	STT3/PglB/AglB, core domain	Domain
H [auth A]	IPR001714	Peptidase M24, methionine aminopeptidase	Family
H [auth A]	IPR050247	Methionine Aminopeptidase Type 2	Family
H [auth A]	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
H [auth A]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
H [auth A]	IPR002468	Peptidase M24A, methionine aminopeptidase, subfamily 2	Family
H [auth A]	IPR018349	Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site	Binding Site
H [auth A]	IPR036005	Creatinase/aminopeptidase-like	Homologous Superfamily
H [auth A]	IPR000994	Peptidase M24	Domain
E [auth Lk]	IPR002675	Large ribosomal subunit protein eL38	Family
E [auth Lk]	IPR038464	Large ribosomal subunit protein eL38 superfamily	Homologous Superfamily
C [auth LY]	IPR005756	Large ribosomal subunit protein uL24, eukaryota_archaea	Family
C [auth LY]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
C [auth LY]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
C [auth LY]	IPR005824	KOW	Domain
C [auth LY]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
B [auth LX]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
B [auth LX]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
B [auth LX]	IPR005633	Large ribosomal subunit protein uL23, N-terminal	Domain
B [auth LX]	IPR013025	Large ribosomal subunit protein uL23-like	Family
A [auth LR]	IPR056809	GCN1-like, HEAT repeats	Domain
A [auth LR]	IPR016024	Armadillo-type fold	Homologous Superfamily
A [auth LR]	IPR023638	Large ribosomal subunit protein eL19, conserved site	Conserved Site
A [auth LR]	IPR057546	Stalled ribosome sensor GCN1-like, HEAT repeats region	Domain
A [auth LR]	IPR057260	Ribosomal protein L19e, C-terminal domain	Domain
A [auth LR]	IPR004155	PBS lyase HEAT-like repeat	Repeat
A [auth LR]	IPR034085	TOG domain	Domain
A [auth LR]	IPR019399	Parkin co-regulated protein	Family
A [auth LR]	IPR033935	Large ribosomal subunit protein eL19, eukaryotic	Domain
A [auth LR]	IPR021133	HEAT, type 2	Repeat
A [auth LR]	IPR015972	Large ribosomal subunit protein eL19, domain 1	Homologous Superfamily
A [auth LR]	IPR057259	Ribosomal protein L19e, N-terminal domain	Domain
A [auth LR]	IPR011989	Armadillo-like helical	Homologous Superfamily
A [auth LR]	IPR022716	Gcn1, N-terminal	Domain
A [auth LR]	IPR035970	Large ribosomal subunit protein eL19 superfamily	Homologous Superfamily
A [auth LR]	IPR000196	Large ribosomal subunit protein eL19 domain	Domain
A [auth LR]	IPR056810	Stalled ribosome sensor GCN1-like, N-terminal	Domain