8OH4 | pdb_00008oh4

Subtomogram averaging structure of cofilactin filament inside microtubule lumen of Drosophila S2 cell protrusion.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
J [auth L]	SCOP2B Superfamily	Actin depolymerizing proteins	8078893	3000430	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Actin depolymerizing proteins	8078893	3000430	SCOP2B (2022-06-29)
L [auth M]	SCOP2B Superfamily	Actin depolymerizing proteins	8078893	3000430	SCOP2B (2022-06-29)
H [auth K]	SCOP2B Superfamily	Actin depolymerizing proteins	8078893	3000430	SCOP2B (2022-06-29)
F [auth J]	SCOP2B Superfamily	Actin depolymerizing proteins	8078893	3000430	SCOP2B (2022-06-29)
D [auth I]	SCOP2B Superfamily	Actin depolymerizing proteins	8078893	3000430	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Actin-like ATPases	8092415	3000092	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Actin-like ATPases	8082531	3000092	SCOP2B (2022-06-29)
M [auth H]	SCOP2B Superfamily	Actin-like ATPases	8092415	3000092	SCOP2B (2022-06-29)
M [auth H]	SCOP2B Superfamily	Actin-like ATPases	8082531	3000092	SCOP2B (2022-06-29)
K [auth G]	SCOP2B Superfamily	Actin-like ATPases	8082531	3000092	SCOP2B (2022-06-29)
K [auth G]	SCOP2B Superfamily	Actin-like ATPases	8092415	3000092	SCOP2B (2022-06-29)
I [auth F]	SCOP2B Superfamily	Actin-like ATPases	8092415	3000092	SCOP2B (2022-06-29)
I [auth F]	SCOP2B Superfamily	Actin-like ATPases	8082531	3000092	SCOP2B (2022-06-29)
G [auth E]	SCOP2B Superfamily	Actin-like ATPases	8092415	3000092	SCOP2B (2022-06-29)
G [auth E]	SCOP2B Superfamily	Actin-like ATPases	8082531	3000092	SCOP2B (2022-06-29)
E [auth D]	SCOP2B Superfamily	Actin-like ATPases	8092415	3000092	SCOP2B (2022-06-29)
E [auth D]	SCOP2B Superfamily	Actin-like ATPases	8082531	3000092	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Actin-like ATPases	8092415	3000092	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Actin-like ATPases	8082531	3000092	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Actin-like ATPases	8082531	3000092	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Actin-like ATPases	8092415	3000092	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J [auth L]	Pkinase, ABC1	e8oh4L1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
N	Pkinase, ABC1	e8oh4N1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
L [auth M]	Pkinase, ABC1	e8oh4M1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
H [auth K]	Pkinase, ABC1	e8oh4K1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
F [auth J]	Pkinase, ABC1	e8oh4J1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
D [auth I]	Pkinase, ABC1	e8oh4I1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
A	Pkinase, ABC1	e8oh4A1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
M [auth H]	Pkinase, ABC1	e8oh4H1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
K [auth G]	Pkinase, ABC1	e8oh4G1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
I [auth F]	Pkinase, ABC1	e8oh4F1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
G [auth E]	Pkinase, ABC1	e8oh4E1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
E [auth D]	Pkinase, ABC1	e8oh4D1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
C	Pkinase, ABC1	e8oh4C1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)
B	Pkinase, ABC1	e8oh4B1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Pkinase, ABC1	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], N	PF00241	Cofilin/tropomyosin-type actin-binding protein (Cofilin_ADF)	Cofilin/tropomyosin-type actin-binding protein	Severs actin filaments and binds to actin monomers.	Domain
A, B, C, E [auth D], G [auth E], A, B, C, E [auth D], G [auth E], I [auth F], K [auth G], M [auth H]	PF00022	Actin (Actin)	Actin	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], N	Cofilin/actin-depolymerizing factor homolog	cytoskeletal protein binding actin binding protein-containing complex binding protein binding binding actin filament binding	microtubule organizing center organization centrosome separation microtubule cytoskeleton organization cellular component organization organelle organization centrosome cycle cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization cell cycle process developmental process multicellular organismal process microtubule organizing center organization centrosome separation microtubule cytoskeleton organization cellular component organization organelle organization centrosome cycle cellular process microtubule-based process cell cycle cellular component organization or biogenesis cytoskeleton organization cell cycle process developmental process multicellular organismal process head development mushroom body development animal organ development brain development nervous system development multicellular organism development central nervous system development anatomical structure development system development mitotic cell cycle process cytoskeleton-dependent cytokinesis mitotic cytokinesis cytokinesis cell division mitotic cell cycle lamellipodium assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component assembly lamellipodium organization cell projection assembly imaginal disc morphogenesis segmentation appendage segmentation pattern specification process metamorphosis leg disc morphogenesis instar larval or pupal morphogenesis imaginal disc development post-embryonic animal morphogenesis post-embryonic development animal organ morphogenesis imaginal disc-derived leg morphogenesis appendage development post-embryonic appendage morphogenesis leg disc development instar larval or pupal development regionalization imaginal disc-derived appendage morphogenesis anatomical structure morphogenesis imaginal disc-derived leg segmentation appendage morphogenesis imaginal disc-derived appendage development actin filament severing actin filament-based process protein polymerization actin polymerization or depolymerization actin filament polymerization actin cytoskeleton organization protein-containing complex organization actin filament organization protein-containing complex assembly supramolecular fiber organization cellular component disassembly protein-containing complex disassembly actin filament depolymerization protein depolymerization sensory organ development eye development visual system development eye morphogenesis compound eye development compound eye morphogenesis sensory organ morphogenesis sensory system development axonogenesis cellular developmental process plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis neurogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation axon development cell morphogenesis involved in neuron differentiation generation of neurons neuron development regulation of localization establishment of protein localization regulation of cellular process regulation of protein localization transport positive regulation of biological process positive regulation of establishment of protein localization positive regulation of secretion by cell protein localization to extracellular region positive regulation of protein transport localization regulation of secretion by cell secretion by cell positive regulation of secretion intracellular protein localization positive regulation of cellular process regulation of biological process regulation of transport secretion biological regulation regulation of establishment of protein localization establishment of protein localization to extracellular region export from cell regulation of protein transport protein secretion establishment of localization positive regulation of protein secretion regulation of protein secretion regulation of secretion positive regulation of transport protein transport macromolecule localization positive regulation of protein localization establishment of ommatidial planar polarity establishment or maintenance of cell polarity establishment of tissue polarity morphogenesis of a polarized epithelium establishment of planar polarity epithelium development morphogenesis of an epithelium tissue development tissue morphogenesis sexual reproduction reproductive process meiotic cell cycle meiotic cytokinesis meiotic cell cycle process regulation of cellular component organization regulation of cell projection organization regulation of cell projection assembly regulation of cellular component biogenesis regulation of plasma membrane bounded cell projection assembly regulation of lamellipodium assembly regulation of lamellipodium organization regulation of plasma membrane bounded cell projection organization assembly of actomyosin apparatus involved in cytokinesis actomyosin structure organization cortical cytoskeleton organization actomyosin contractile ring assembly cortical actin cytoskeleton organization cytokinetic process actomyosin contractile ring organization actin filament fragmentation rhabdomere development photoreceptor cell differentiation eye photoreceptor cell differentiation photoreceptor cell development eye photoreceptor cell development compound eye photoreceptor development compound eye photoreceptor cell differentiation cellular process involved in reproduction in multicellular organism developmental process involved in reproduction female gamete generation epithelial cell differentiation gamete generation follicle cell of egg chamber development tissue migration ameboidal-type cell migration epithelial cell migration cell migration cell motility oogenesis multicellular organismal reproductive process follicle cell of egg chamber migration epithelium migration epithelial cell development border follicle cell migration germ cell development multicellular organismal-level homeostasis epithelial structure maintenance homeostatic process anatomical structure homeostasis tissue homeostasis epidermis development hair cell differentiation wing disc morphogenesis epidermal cell differentiation wing disc development establishment of imaginal disc-derived wing hair orientation imaginal disc-derived wing morphogenesis imaginal disc-derived wing hair organization non-sensory hair organization gonad development reproductive system development female gonad development sex differentiation female sex differentiation development of primary female sexual characteristics development of primary sexual characteristics reproductive structure development	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear lumen nuclear matrix cytoskeleton membraneless organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle nuclear lumen nuclear matrix cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton cytoplasm cytosol nucleoplasm
A, B, C, E [auth D], G [auth E], A, B, C, E [auth D], G [auth E], I [auth F], K [auth G], M [auth H]	Actin-5C	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	maintenance of protein location localization cellular localization maintenance of protein location in cell macromolecule localization cellular process intracellular protein localization maintenance of location maintenance of location in cell mitotic cell cycle process cytoskeleton-dependent cytokinesis mitotic cytokinesis cytokinesis cell division maintenance of protein location localization cellular localization maintenance of protein location in cell macromolecule localization cellular process intracellular protein localization maintenance of location maintenance of location in cell mitotic cell cycle process cytoskeleton-dependent cytokinesis mitotic cytokinesis cytokinesis cell division cell cycle mitotic cell cycle cell cycle process sexual reproduction cellular developmental process reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction female gamete generation gamete generation cellular component organization fusome organization cell differentiation anatomical structure development cellular component organization or biogenesis developmental process germarium-derived egg chamber formation oogenesis multicellular organismal reproductive process anatomical structure morphogenesis ovarian fusome organization organelle organization anatomical structure formation involved in morphogenesis germ cell development spermatid development multicellular organismal process spermatid differentiation spermatogenesis cellularization multicellular organism development sperm individualization male gamete generation tube morphogenesis tube development tube formation chromatin organization chromatin remodeling	membrane-bounded organelle ATPase complex protein-containing complex intracellular anatomical structure nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome chromosome intracellular organelle lumen intracellular organelle cellular anatomical structure membraneless organelle SWI/SNF superfamily-type complex membrane-bounded organelle ATPase complex protein-containing complex intracellular anatomical structure nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome chromosome intracellular organelle lumen intracellular organelle cellular anatomical structure membraneless organelle SWI/SNF superfamily-type complex INO80-type complex catalytic complex intracellular membraneless organelle chromatin intracellular membrane-bounded organelle Ino80 complex organelle lumen organelle nuclear lumen brahma complex cytoskeleton actin cytoskeleton

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], N	IPR029006	ADF-H/Gelsolin-like domain superfamily	Homologous Superfamily
D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], N	IPR017904	ADF/Cofilin	Family
D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], D [auth I], F [auth J], H [auth K], J [auth L], L [auth M], N	IPR002108	Actin-depolymerising factor homology domain	Domain
A, B, C, E [auth D], G [auth E], A, B, C, E [auth D], G [auth E], I [auth F], K [auth G], M [auth H]	IPR020902	Actin/actin-like conserved site	Conserved Site
A, B, C, E [auth D], G [auth E], A, B, C, E [auth D], G [auth E], I [auth F], K [auth G], M [auth H]	IPR004001	Actin, conserved site	Conserved Site
A, B, C, E [auth D], G [auth E], A, B, C, E [auth D], G [auth E], I [auth F], K [auth G], M [auth H]	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
A, B, C, E [auth D], G [auth E], A, B, C, E [auth D], G [auth E], I [auth F], K [auth G], M [auth H]	IPR004000	Actin family	Family