8OF8 | pdb_00008of8

Cryo-EM structure of actomyosin-5a-S1 with the full-length lever (nucleotide free)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth J]SCOP2B SuperfamilyActin-like ATPases 8040509 3000092 SCOP2B (2022-06-29)
G [auth J]SCOP2B SuperfamilyActin-like ATPases 8040506 3000092 SCOP2B (2022-06-29)
H [auth K]SCOP2B SuperfamilyActin-like ATPases 8040506 3000092 SCOP2B (2022-06-29)
H [auth K]SCOP2B SuperfamilyActin-like ATPases 8040509 3000092 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyActin-like ATPases 8040509 3000092 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyActin-like ATPases 8040506 3000092 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth M]e8of8M01 A: ATPD N-terminal domain-likeX: N-terminal domain of the delta subunit of the F1F0-ATP synthaseH: Galactose-binding domain-likeT: Oxidored_nitroF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pairDomain
J [auth M]PF00612IQ calmodulin-binding motif (IQ)IQ calmodulin-binding motif- Motif
J [auth M]PF00063Myosin head (motor domain) (Myosin_head)Myosin head (motor domain)Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Calmodulin-1
J [auth M]Unconventional myosin-Va
G [auth J],
H [auth K],
I [auth L]
Actin, alpha skeletal muscle

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
G [auth J],
H [auth K],
I [auth L]
HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322