8KHR | pdb_00008khr

Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth B]SCOP2B SuperfamilyInterleukin 8-like chemokines 8105475 3001955 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth B]DUF4962e8khrB01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F: DUF4962ECOD (v294.1)
C [auth L]DUF4962e8khrL01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F: DUF4962ECOD (v294.1)
B [auth H]DUF4962e8khrH01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F: DUF4962ECOD (v294.1)
A [auth C]DUF4962e8khrC01 A: a/b three-layered sandwichesX: ATP-grasp_6H: ATP-grasp_6T: ATP-grasp_6F: DUF4962ECOD (v294.1)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth L]Light ChainIGKV1 Kappasoluble gp42 | envelope glycoprotein h | envelope glycoprotein lSAbDab (2026-04-10)
B [auth H]Heavy ChainIGHV1 -soluble gp42 | envelope glycoprotein h | envelope glycoprotein lSAbDab (2026-04-10)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth B]Envelope glycoprotein L-
D [auth A]Envelope glycoprotein H-
C [auth L]2C1 light chain---
B [auth H]2C1 heavy chain---
A [auth C]Soluble gp42 -