8KFA | pdb_00008kfa

Cryo-EM structure of HSV-1 gB with D48 Fab complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyViral glycoprotein ectodomain-like 8034129 3001498 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyViral glycoprotein ectodomain-like 8034129 3001498 SCOP2B (2022-06-29)
I [auth C]SCOP2B SuperfamilyViral glycoprotein ectodomain-like 8034129 3001498 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth H]e8kfaH01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)
C [auth A]e8kfaA02 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)
B [auth L]e8kfaL01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF:ECOD (v294.2)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H],
D,
G [auth E]
Heavy ChainIGHV3 -envelope glycoprotein bSAbDab (2026-05-08)
B [auth L],
E [auth F],
H [auth G]
Light ChainIGKV1 Kappaenvelope glycoprotein bSAbDab (2026-05-08)