Annotations: 8K6Q

Crystal structure of HOIL-1L LTM domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth C]	Sod_Fe_N	e8k6qC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Sod_Fe_N	ECOD (v295.2)
C [auth A]	Sod_Fe_N	e8k6qA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Sod_Fe_N	ECOD (v295.2)
B [auth D]	Sod_Fe_N	e8k6qD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Sod_Fe_N	ECOD (v295.2)
A [auth B]	Bac_luciferase	e8k6qB01	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Bac_luciferase	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth D], C [auth A], D [auth C]	PF25393	LUBAC thetering domain (LTM)	LUBAC thetering domain	This entry describes the Linear Ubiquitin Chain Assembly Complex (LUBAC)-tethering domain (LTM), which is located in the N-terminal region of the HOIL-1L protein in Eukaryotes. This domain facilitates interaction with SHARPIN, a key component in the ...	This entry describes the Linear Ubiquitin Chain Assembly Complex (LUBAC)-tethering domain (LTM), which is located in the N-terminal region of the HOIL-1L protein in Eukaryotes. This domain facilitates interaction with SHARPIN, a key component in the formation of the multi-protein E3 ubiquitin ligase LUBAC complex [1,2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth D], C [auth A], D [auth C]	RanBP-type and C3HC4-type zinc finger-containing protein 1	enzyme regulator activity ubiquitin ligase activator activity enzyme activator activity ubiquitin-protein transferase regulator activity molecular function activator activity molecular function regulator activity ubiquitin-protein transferase activator activity transcription coactivator activity transcription regulator activity transcription coregulator activity protein binding binding ubiquitin binding ubiquitin-like protein binding enzyme regulator activity ubiquitin ligase activator activity enzyme activator activity ubiquitin-protein transferase regulator activity molecular function activator activity molecular function regulator activity ubiquitin-protein transferase activator activity transcription coactivator activity transcription regulator activity transcription coregulator activity protein binding binding ubiquitin binding ubiquitin-like protein binding molecular sequestering activity protein sequestering activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity identical protein binding	protein polyubiquitination primary metabolic process protein ubiquitination macromolecule modification metabolic process cellular process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein linear polyubiquitination protein modification by small protein conjugation or removal cellular response to stimulus protein polyubiquitination primary metabolic process protein ubiquitination macromolecule modification metabolic process cellular process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein linear polyubiquitination protein modification by small protein conjugation or removal cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction positive regulation of cellular process regulation of biological process regulation of signaling biological regulation positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of response to stimulus regulation of cell communication regulation of canonical NF-kappaB signal transduction positive regulation of signaling immune response-regulating cell surface receptor signaling pathway immune response-activating signaling pathway immune response-regulating signaling pathway positive regulation of immune response regulation of immune system process positive regulation of immune system process cell surface receptor signaling pathway immune response-activating cell surface receptor signaling pathway immune response T cell receptor signaling pathway immune system process regulation of immune response antigen receptor-mediated signaling pathway activation of immune response positive regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death positive regulation of apoptotic process apoptotic process programmed cell death defense response to bacterium biological process involved in interspecies interaction between organisms response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus catabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process regulation of non-canonical NF-kappaB signal transduction non-canonical NF-kappaB signal transduction positive regulation of non-canonical NF-kappaB signal transduction	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol LUBAC complex protein-containing complex ubiquitin ligase complex catalytic complex transferase complex intracellular protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth D], C [auth A], D [auth C]	IPR044066	TRIAD supradomain	Domain
A [auth B], B [auth D], C [auth A], D [auth C]	IPR047557	Heme-oxidized IRP2 ubiquitin ligase 1, Rcat domain	Domain
A [auth B], B [auth D], C [auth A], D [auth C]	IPR051628	Linear Ubiquitination-Associated E3 Ligases	Family
A [auth B], B [auth D], C [auth A], D [auth C]	IPR057468	HOIL-1/Sharpin, LUBAC thetering domain	Domain
A [auth B], B [auth D], C [auth A], D [auth C]	IPR036443	Zinc finger, RanBP2-type superfamily	Homologous Superfamily
A [auth B], B [auth D], C [auth A], D [auth C]	IPR017907	Zinc finger, RING-type, conserved site	Conserved Site
A [auth B], B [auth D], C [auth A], D [auth C]	IPR000626	Ubiquitin-like domain	Domain
A [auth B], B [auth D], C [auth A], D [auth C]	IPR027370	Zinc finger, RING-type, eukaryotic	Domain
A [auth B], B [auth D], C [auth A], D [auth C]	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A [auth B], B [auth D], C [auth A], D [auth C]	IPR047558	Heme-oxidized IRP2 ubiquitin ligase 1, BRcat domain	Domain
A [auth B], B [auth D], C [auth A], D [auth C]	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
A [auth B], B [auth D], C [auth A], D [auth C]	IPR001876	Zinc finger, RanBP2-type	Domain
A [auth B], B [auth D], C [auth A], D [auth C]	IPR001841	Zinc finger, RING-type	Domain
A [auth B], B [auth D], C [auth A], D [auth C]	IPR047559	Heme-oxidized IRP2 ubiquitin ligase 1, modified RING finger, HC subclass	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth B], B [auth D], C [auth A], D [auth C]	: Q9BYM8	polyglucosan body myopathy 1 with or without immunodeficiency Cardiomegaly arthrogryposis juvenile dermatomyositis medulloblastoma plasma cell myeloma tuberculosis dermatomyositis lymphoplasmacytic lymphoma osteosarcoma glioblastoma malignant ependymoma ovarian cancer rhabdomyolysis