Structure of the bacteriophage lambda neck
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| M | SCOP2B Superfamily | Phage tail proteins | 8040058 | 3000268 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | Phage tail proteins | 8040058 | 3000268 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | Phage tail proteins | 8040058 | 3000268 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | Phage tail proteins | 8040058 | 3000268 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | Phage tail proteins | 8040058 | 3000268 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | Phage tail proteins | 8040058 | 3000268 | SCOP2B (2022-06-29) |
| G [auth A] | SCOP2B Superfamily | Phage tail protein-like | 8035093 | 3001913 | SCOP2B (2022-06-29) |
| H [auth B] | SCOP2B Superfamily | Phage tail protein-like | 8035093 | 3001913 | SCOP2B (2022-06-29) |
| J [auth D] | SCOP2B Superfamily | Phage tail protein-like | 8035093 | 3001913 | SCOP2B (2022-06-29) |
| K [auth E] | SCOP2B Superfamily | Phage tail protein-like | 8035093 | 3001913 | SCOP2B (2022-06-29) |
| L [auth F] | SCOP2B Superfamily | Phage tail protein-like | 8035093 | 3001913 | SCOP2B (2022-06-29) |
| I [auth C] | SCOP2B Superfamily | Phage tail protein-like | 8035093 | 3001913 | SCOP2B (2022-06-29) |
| A [auth G] | SCOP2B Superfamily | T6SS-like | 8091256 | 3000580 | SCOP2B (2022-06-29) |
| B [auth H] | SCOP2B Superfamily | T6SS-like | 8091256 | 3000580 | SCOP2B (2022-06-29) |
| C [auth I] | SCOP2B Superfamily | T6SS-like | 8091256 | 3000580 | SCOP2B (2022-06-29) |
| D [auth J] | SCOP2B Superfamily | T6SS-like | 8091256 | 3000580 | SCOP2B (2022-06-29) |
| E [auth K] | SCOP2B Superfamily | T6SS-like | 8091256 | 3000580 | SCOP2B (2022-06-29) |
| F [auth L] | SCOP2B Superfamily | T6SS-like | 8091256 | 3000580 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| M | Cullin_AB | e8k37M1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| O | Cullin_AB | e8k37O1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| P | Cullin_AB | e8k37P1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| R | Cullin_AB | e8k37R1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| Q | Cullin_AB | e8k37Q1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| N | Cullin_AB | e8k37N1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| G [auth A] | Cullin_AB | e8k37A1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| H [auth B] | Cullin_AB | e8k37B1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| J [auth D] | Cullin_AB | e8k37D1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| K [auth E] | Cullin_AB | e8k37E1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| L [auth F] | Cullin_AB | e8k37F1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| I [auth C] | Cullin_AB | e8k37C1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| A [auth G] | Cullin_AB | e8k37G1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| B [auth H] | Cullin_AB | e8k37H1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| C [auth I] | Cullin_AB | e8k37I1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| D [auth J] | Cullin_AB | e8k37J1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| E [auth K] | Cullin_AB | e8k37K1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
| F [auth L] | Cullin_AB | e8k37L1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF06141 | Phage minor tail protein U (Phage_tail_U) | Phage minor tail protein U | Tail fibre component U of bacteriophage. | Domain | |
| PF16461 | Lambda phage tail tube protein, TTP (Phage_TTP_12) | Lambda phage tail tube protein, TTP | This family represents the phage-tail-tube protein from a set of Siphoviridae from Gammaproteobacteria. Tail tube proteins polymerise with the assistance of the Tail-tip complex, a tape measure protein and two chaperones. Infectivity of host is deliv ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR053734 | Bacteriophage Head-Tail Connecting Superfamily | Homologous Superfamily | |
| IPR008018 | Bacteriophage tail attachment protein FII | Family | |
| IPR035934 | Phage tail protein-like superfamily | Homologous Superfamily | |
| IPR009312 | Minor tail protein U-like | Family | |
| IPR038512 | GpU-like superfamily | Homologous Superfamily | |
| IPR003343 | Bacterial Ig-like domain, group 2 | Domain | |
| IPR032494 | Lambda phage tail tube protein, N-terminal | Domain |














