8K37 | pdb_00008k37

Structure of the bacteriophage lambda neck


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
MSCOP2B SuperfamilyPhage tail proteins 8040058 3000268 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyPhage tail proteins 8040058 3000268 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyPhage tail proteins 8040058 3000268 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyPhage tail proteins 8040058 3000268 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyPhage tail proteins 8040058 3000268 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyPhage tail proteins 8040058 3000268 SCOP2B (2022-06-29)
G [auth A]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
H [auth B]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
J [auth D]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
K [auth E]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
L [auth F]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
I [auth C]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
A [auth G]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
B [auth H]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
C [auth I]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
D [auth J]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
E [auth K]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
F [auth L]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
MCullin_ABe8k37M1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
OCullin_ABe8k37O1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
PCullin_ABe8k37P1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
RCullin_ABe8k37R1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
QCullin_ABe8k37Q1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
NCullin_ABe8k37N1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
G [auth A]Cullin_ABe8k37A1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
H [auth B]Cullin_ABe8k37B1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
J [auth D]Cullin_ABe8k37D1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
K [auth E]Cullin_ABe8k37E1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
L [auth F]Cullin_ABe8k37F1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
I [auth C]Cullin_ABe8k37C1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
A [auth G]Cullin_ABe8k37G1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
B [auth H]Cullin_ABe8k37H1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
C [auth I]Cullin_ABe8k37I1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
D [auth J]Cullin_ABe8k37J1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
E [auth K]Cullin_ABe8k37K1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)
F [auth L]Cullin_ABe8k37L1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF06141Phage minor tail protein U (Phage_tail_U)Phage minor tail protein UTail fibre component U of bacteriophage. Domain
PF16461Lambda phage tail tube protein, TTP (Phage_TTP_12)Lambda phage tail tube protein, TTPThis family represents the phage-tail-tube protein from a set of Siphoviridae from Gammaproteobacteria. Tail tube proteins polymerise with the assistance of the Tail-tip complex, a tape measure protein and two chaperones. Infectivity of host is deliv ...This family represents the phage-tail-tube protein from a set of Siphoviridae from Gammaproteobacteria. Tail tube proteins polymerise with the assistance of the Tail-tip complex, a tape measure protein and two chaperones. Infectivity of host is delivered through the tube [1]. Members of this family from hexameric ring arrangement [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
M, N, O, P, Q
Head-tail connector protein FII-
Tail tube terminator protein-
Tail tube protein-