8JVB | pdb_00008jvb

Cryo-EM structure of the Type II secretion system protein from Acidithiobacillus caldus


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
NV-sete8jvbN1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
MV-sete8jvbM1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
LV-sete8jvbL1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
KV-sete8jvbK1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
JV-sete8jvbJ1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
IV-sete8jvbI1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
HV-sete8jvbH1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
GV-sete8jvbG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
FV-sete8jvbF1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
EV-sete8jvbE1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
DV-sete8jvbD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
CV-sete8jvbC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
BV-sete8jvbB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: V-setECOD (v295)
AChloroa_b-binde8jvbA01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Chloroa_b-bindECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00263Bacterial type II and III secretion system protein (Secretin)Bacterial type II and III secretion system protein- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR050810Bacterial Secretion System Channel ProteinFamily
A, B, C, D, E
IPR004846Type II/III secretion system, secretin-like domainDomain
A, B, C, D, E
IPR001775GspD/PilQ familyFamily
A, B, C, D, E
IPR032789Pilus formation protein, N-terminalDomain