8JUQ | pdb_00008juq

Crystal structure of Chitoporin from Vibrio harveyi in complex with gentamicin c1a

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D [auth G], E [auth H], A, B, C, D [auth G], E [auth H], F [auth I]	PF13609	Gram-negative porin (Porin_4)	Gram-negative porin		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D [auth G], E [auth H], A, B, C, D [auth G], E [auth H], F [auth I]	Chitoporin	wide pore channel activity passive transmembrane transporter activity channel activity porin activity transporter activity transmembrane transporter activity cation binding ion binding binding metal ion binding small molecule binding	transmembrane transport localization transport monoatomic ion transmembrane transport monoatomic ion transport cellular process establishment of localization	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D [auth G], E [auth H], A, B, C, D [auth G], E [auth H], F [auth I]	IPR050298	Gram-negative bacterial outer membrane porin	Family
A, B, C, D [auth G], E [auth H], A, B, C, D [auth G], E [auth H], F [auth I]	IPR033900	Porin domain, Gram-negative type	Domain
A, B, C, D [auth G], E [auth H], A, B, C, D [auth G], E [auth H], F [auth I]	IPR023614	Porin domain superfamily	Homologous Superfamily
A, B, C, D [auth G], E [auth H], A, B, C, D [auth G], E [auth H], F [auth I]	IPR001702	Porin, Gram-negative type	Family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D [auth G], E [auth H] A, B, C, D [auth G], E [auth H], F [auth I]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C, D [auth G], E [auth H] A, B, C, D [auth G], E [auth H], F [auth I]	MemProtMD	Annotated as membrane protein by MemProtMD

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.