Annotations: 8JCA

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Ras-like P-loop GTPases	8061451	3002022	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF02759	RUN domain (RUN)	RUN domain	-	Family
A	PF00025	ADP-ribosylation factor family (Arf)	ADP-ribosylation factor family	Pfam combines a number of different Prosite families together	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Pleckstrin homology domain-containing family M member 2	cytoskeletal protein binding protein binding binding kinesin binding	lymphocyte mediated immunity biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus leukocyte mediated cytotoxicity response to biotic stimulus immune effector process immune system process defense response to other organism response to stress natural killer cell mediated cytotoxicity lymphocyte mediated immunity biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus leukocyte mediated cytotoxicity response to biotic stimulus immune effector process immune system process defense response to other organism response to stress natural killer cell mediated cytotoxicity innate immune response leukocyte mediated immunity cellular process response to external biotic stimulus natural killer cell mediated immunity cell killing regulation of localization localization regulation of biological process regulation of protein localization macromolecule localization biological regulation intracellular protein localization organelle localization lysosome localization vacuolar localization cellular component organization organelle organization cellular component organization or biogenesis Golgi organization endomembrane system organization	vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm vacuolar membrane membrane-bounded organelle intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle lysosomal membrane cytoplasm organelle membrane lysosome endosome membrane endosome intracellular vesicle endomembrane system cytoplasmic vesicle membrane vesicle membrane cytoplasmic vesicle vesicle
A	ADP-ribosylation factor-like protein 8B	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cytoskeletal protein binding protein binding tubulin binding alpha-tubulin binding GDP binding pyrophosphatase activity GTPase activity G protein activity ribonucleoside triphosphate phosphatase activity molecular function regulator activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity beta-tubulin binding	exit from host cell biological process involved in interspecies interaction between organisms non-lytic viral release viral process viral exocytosis viral release from host cell viral life cycle biological process involved in interaction with host biological process involved in symbiotic interaction membrane organization catabolic process transport macroautophagy membrane fusion exit from host cell biological process involved in interspecies interaction between organisms non-lytic viral release viral process viral exocytosis viral release from host cell viral life cycle biological process involved in interaction with host biological process involved in symbiotic interaction membrane organization catabolic process transport macroautophagy membrane fusion organelle membrane fusion autophagy establishment of localization vesicle-mediated transport vesicle organization cellular component organization organelle fusion localization organelle organization autophagosome-lysosome fusion cellular process metabolic process cellular component organization or biogenesis vesicle fusion process utilizing autophagic mechanism import into cell cellular component biogenesis lysosome organization cellular component assembly phagolysosome assembly phagocytosis vacuole organization organelle assembly lytic vacuole organization phagosome-lysosome fusion phagosome maturation endocytosis early endosome to Golgi transport cellular localization intracellular transport endosomal transport cytosolic transport retrograde transport, endosome to Golgi establishment of localization in cell Golgi vesicle transport anterograde axonal transport axonal transport axo-dendritic transport microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cell division cell cycle chromosome segregation cell cycle process organelle localization lysosome localization vacuolar localization establishment of protein localization nitrogen compound transport protein transport macromolecule localization intracellular protein localization protein localization to endosome protein localization to organelle protein localization to early endosome antigen processing and presentation antigen processing and presentation of peptide or polysaccharide antigen via MHC class II immune system process antigen processing and presentation of polysaccharide antigen via MHC class II antigen processing and presentation following phagocytosis lymphocyte mediated immunity response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus leukocyte mediated cytotoxicity response to biotic stimulus immune effector process defense response to other organism response to stress natural killer cell mediated cytotoxicity innate immune response leukocyte mediated immunity response to external biotic stimulus natural killer cell mediated immunity cell killing regulated exocytosis secretion export from cell calcium ion regulated lysosome exocytosis secretion by cell exocytosis calcium-ion regulated exocytosis late endosome to lysosome transport vacuolar transport lysosomal transport wound healing plasma membrane repair plasma membrane organization response to wounding endomembrane system organization endosome to lysosome transport intracellular cholesterol transport vesicle-mediated cholesterol transport organic hydroxy compound transport intracellular sterol transport sterol transport intracellular lipid transport endosome to lysosome transport of low-density lipoprotein particle lipid localization lipid transport cholesterol transport	midbody cellular anatomical structure membrane intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle midzone microtubule cytoskeleton extracellular exosome membrane-bounded organelle midbody cellular anatomical structure membrane intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle midzone microtubule cytoskeleton extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle cytoplasm cytosol endosome membrane endosome intracellular vesicle late endosome membrane intracellular membrane-bounded organelle endomembrane system cytoplasmic vesicle membrane bounding membrane of organelle cytoplasmic vesicle vesicle membrane late endosome organelle membrane lytic vacuole vacuole lysosome vacuolar membrane lytic vacuole membrane lysosomal membrane cytolytic granule cytolytic granule membrane early endosome early endosome membrane synapse cell junction neuron projection cytoplasm axon axon cytoplasm neuron projection cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR037213	RUN domain superfamily	Homologous Superfamily
B	IPR004012	RUN domain	Domain
B	IPR001849	Pleckstrin homology domain	Domain
B	IPR053015	Pleckstrin homology domain-containing protein M2	Family
B	IPR047327	PLEKHM2, RUN domain	Domain
B	IPR011993	PH-like domain superfamily	Homologous Superfamily
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A	IPR005225	Small GTP-binding domain	Domain
A	IPR044154	ADP-ribosylation factor-like protein 8A/8B	Family
A	IPR006689	Small GTPase superfamily, ARF/SAR type	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: Q8IWE5	alcoholic pancreatitis malignant ependymoma large cell medulloblastoma medulloblastoma left ventricular noncompaction psoriasis
A	Pharos: Q9NVJ2	atypical teratoid rhabdoid tumor dermatomyositis large cell medulloblastoma medulloblastoma Pick disease tuberculosis breast cancer glioblastoma lymphoplasmacytic lymphoma ovarian cancer plasma cell myeloma breast carcinoma invasive ductal breast carcinoma malignant pancreatic neoplasm pancreatic ductal adenocarcinoma atypical teratoid rhabdoid tumor dermatomyositis large cell medulloblastoma medulloblastoma Pick disease tuberculosis breast cancer glioblastoma lymphoplasmacytic lymphoma ovarian cancer plasma cell myeloma breast carcinoma invasive ductal breast carcinoma malignant pancreatic neoplasm pancreatic ductal adenocarcinoma primitive neuroectodermal tumor

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.