Annotations: 8JC7

Cryo-EM structure of Vibrio campbellii alpha-hemolysin

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G	Cullin_AB	e8jc7G1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v295.2)
F	Cullin_AB	e8jc7F1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v295.2)
E	Cullin_AB	e8jc7E1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v295.2)
D	Cullin_AB	e8jc7D1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v295.2)
C	Cullin_AB	e8jc7C1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v295.2)
B	Cullin_AB	e8jc7B1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v295.2)
A	Cullin_AB	e8jc7A1	A: alpha arrays	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G	Hemolysin	-	biological process involved in interspecies interaction between organisms cytolysis in another organism cellular process disruption of cell in another organism disruption of anatomical structure in another organism cytolysis killing of cells of another organism cell killing	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G	IPR043080	Hemolytic toxin, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR044883	Hemolysin, pre-stem domain	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR036404	Jacalin-like lectin domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR016183	Leukocidin/Hemolysin toxin	Domain
A, B, C, D, E A, B, C, D, E, F, G	IPR022220	Hemolytic toxin, N-terminal domain	Domain
A, B, C, D, E A, B, C, D, E, F, G	IPR032496	Hemolysin, beta-prism lectin	Domain
A, B, C, D, E A, B, C, D, E, F, G	IPR035992	Ricin B-like lectins	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G	IPR000772	Ricin B, lectin domain	Domain

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F, G	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Adventitious Membrane Proteins: Beta-sheet Pore-forming Toxins/Attack Complexes	α-hemolysin

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.