8JAY | pdb_00008jay

CrtSPARTA Octamer bound with guide-target

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth M]V-sete8jayM1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: V-setECOD (v295.2)
E [auth I]V-sete8jayI1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: V-setECOD (v295.2)
B [auth A]V-sete8jayA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: V-setECOD (v295.2)
A [auth C]V-sete8jayC1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: V-setECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth D],
D [auth B],
F [auth J],
H [auth N]		PF13676TIR domain (TIR_2)TIR domainThis is a family of Toll-like receptors. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
J [auth F],
L [auth H],
N [auth L],
P		DNA (25-MER)---
I [auth E],
K [auth G],
M [auth K],
O		RNA (5'-R(P*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3')---
C [auth D],
D [auth B],
F [auth J],
H [auth N]		TIR domain-containing protein- -
A [auth C],
B [auth A],
E [auth I],
G [auth M]		Piwi domain-containing protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth D],
D [auth B],
F [auth J],
H [auth N]		IPR000157Toll/interleukin-1 receptor homology (TIR) domainDomain
C [auth D],
D [auth B],
F [auth J],
H [auth N]		IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyHomologous Superfamily
A [auth C],
B [auth A],
E [auth I],
G [auth M]		IPR036397Ribonuclease H superfamilyHomologous Superfamily
A [auth C],
B [auth A],
E [auth I],
G [auth M]		IPR012337Ribonuclease H-like superfamilyHomologous Superfamily