8J7A

Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 1 (PSI-ST1)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth 1]SCOP2B SuperfamilyChlorophyll a-b binding protein8076986 3000343 SCOP2B (2022-06-29)
B [auth 2]SCOP2B SuperfamilyChlorophyll a-b binding protein8107014 3000343 SCOP2B (2022-06-29)
C [auth 3]SCOP2B SuperfamilyChlorophyll a-b binding protein8107012 3000343 SCOP2B (2022-06-29)
D [auth 4]SCOP2B SuperfamilyChlorophyll a-b binding protein8106944 3000343 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB8106954 3000850 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB8106956 3000850 SCOP2B (2022-06-29)
G [auth C]SCOP2B Superfamily4Fe-4S ferredoxins8106962 3000020 SCOP2B (2022-06-29)
H [auth D]SCOP2B SuperfamilyPhotosystem I subunit PsaD8107004 3000951 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyElectron transport accessory proteins8074494 3000325 SCOP2B (2022-06-29)
J [auth F]SCOP2B SuperfamilySubunit III of photosystem I reaction centre PsaF8107006 3000813 SCOP2B (2022-06-29)
L [auth H]SCOP2B SuperfamilyPhotosystem I reaction centre subunit VI8107010 3002733 SCOP2B (2022-06-29)
M [auth I]SCOP2B SuperfamilySubunit VIII of photosystem I reaction centre PsaI8106958 3000819 SCOP2B (2022-06-29)
N [auth J]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre PsaJ8106960 3000824 SCOP2B (2022-06-29)
P [auth L]SCOP2B SuperfamilyPhotosystem I reaction center subunit XI PsaL8107008 3000870 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 1]PF00504e8j7a11 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
B [auth 2]PF00504e8j7a21 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
C [auth 3]PF00504e8j7a31 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
D [auth 4]PF00504e8j7a41 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
E [auth A]PF00223e8j7aA2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
E [auth A]PF00223e8j7aA1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
F [auth B]PF00223e8j7aB2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
F [auth B]PF00223e8j7aB1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
G [auth C]PF00037e8j7aC1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)
H [auth D]PF02531e8j7aD1 A: a+b two layersX: Photosystem I subunit PsaD (From Topology)H: Photosystem I subunit PsaD (From Topology)T: Photosystem I subunit PsaDF: PF02531ECOD (1.6)
I [auth E]PF02427e8j7aE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF02427ECOD (1.6)
J [auth F]PF02507e8j7aF1 A: extended segmentsX: Subunit III of photosystem I reaction centre, PsaF (From Topology)H: Subunit III of photosystem I reaction centre, PsaF (From Topology)T: Subunit III of photosystem I reaction centre, PsaFF: PF02507ECOD (1.6)
K [auth G]PF01241e8j7aG1 A: alpha bundlesX: Photosystem I reaction center subunit X, PsaK (From Topology)H: Photosystem I reaction center subunit X, PsaK (From Topology)T: Photosystem I reaction center subunit X, PsaKF: PF01241ECOD (1.6)
L [auth H]PF03244e8j7aH1 A: extended segmentsX: Subunit VI of Photosystem I reaction centre (From Topology)H: Subunit VI of Photosystem I reaction centre (From Topology)T: Subunit VI of Photosystem I reaction centreF: PF03244ECOD (1.6)
M [auth I]PF00796e8j7aI1 A: extended segmentsX: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology)T: Subunit VIII of photosystem I reaction centre, PsaIF: PF00796ECOD (1.6)
N [auth J]PF01701e8j7aJ1 A: extended segmentsX: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)T: Subunit IX of photosystem I reaction centre, PsaJF: PF01701ECOD (1.6)
O [auth K]PF01241e8j7aK1 A: alpha bundlesX: Photosystem I reaction center subunit X, PsaK (From Topology)H: Photosystem I reaction center subunit X, PsaK (From Topology)T: Photosystem I reaction center subunit X, PsaKF: PF01241ECOD (1.6)
P [auth L]PF02605e8j7aL1 A: alpha bundlesX: Photosystem I reaction center subunit XI, PsaL (From Topology)H: Photosystem I reaction center subunit XI, PsaL (From Topology)T: Photosystem I reaction center subunit XI, PsaLF: PF02605ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]Chlorophyll a-b binding protein 6, chloroplastic
B [auth 2]Photosystem I chlorophyll a/b-binding protein 2, chloroplastic
C [auth 3]Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic
D [auth 4]Chlorophyll a-b binding protein 4, chloroplastic
E [auth A]Photosystem I P700 chlorophyll a apoprotein A1
F [auth B]Photosystem I P700 chlorophyll a apoprotein A2
G [auth C]Photosystem I iron-sulfur center
H [auth D]Photosystem I reaction center subunit II-2, chloroplastic
I [auth E]Photosystem I reaction center subunit IV A, chloroplastic
J [auth F]Photosystem I reaction center subunit III, chloroplastic
K [auth G]Photosystem I reaction center subunit V, chloroplastic-
L [auth H]Photosystem I reaction center subunit VI-2, chloroplastic-
M [auth I]Photosystem I reaction center subunit VIII-
N [auth J]Photosystem I reaction center subunit IX-
O [auth K]Photosystem I reaction center subunit psaK, chloroplastic-
P [auth L]Photosystem I reaction center subunit XI, chloroplastic

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 1]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
A [auth 1]IPR022796Chlorophyll A-B binding proteinFamily
B [auth 2]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
B [auth 2]IPR022796Chlorophyll A-B binding proteinFamily
C [auth 3]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
C [auth 3]IPR022796Chlorophyll A-B binding proteinFamily
D [auth 4]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
D [auth 4]IPR022796Chlorophyll A-B binding proteinFamily
E [auth A]IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
E [auth A]IPR001280Photosystem I PsaA/PsaBFamily
E [auth A]IPR006243Photosystem I PsaAFamily
E [auth A]IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
F [auth B]IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
F [auth B]IPR001280Photosystem I PsaA/PsaBFamily
F [auth B]IPR006244Photosystem I PsaBFamily
F [auth B]IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
G [auth C]IPR017491Photosystem I protein PsaCFamily
G [auth C]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
G [auth C]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
H [auth D]IPR003685Photosystem I PsaDFamily
H [auth D]IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
I [auth E]IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
I [auth E]IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
J [auth F]IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
J [auth F]IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
K [auth G]IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
K [auth G]IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
K [auth G]IPR000549Photosystem I reaction center subunit V/PsaKFamily
K [auth G]IPR017494Photosystem I reaction center subunit VFamily
L [auth H]IPR004928Photosystem I PsaH, reaction centre subunit VIFamily
M [auth I]IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
M [auth I]IPR001302Photosystem I reaction centre subunit VIIIFamily
N [auth J]IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
N [auth J]IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
O [auth K]IPR023618Photosystem I PsaG/PsaK domain, chloroplasticHomologous Superfamily
O [auth K]IPR016370Photosystem I reaction center subunit V/PsaK, plantFamily
O [auth K]IPR000549Photosystem I reaction center subunit V/PsaKFamily
O [auth K]IPR035982Photosystem I reaction centre subunit PsaK superfamilyHomologous Superfamily
O [auth K]IPR017493Photosystem I reaction center subunit psaK, plantFamily
P [auth L]IPR022980Photosystem I, reaction centre subunit XIFamily
P [auth L]IPR036592Photosystem I PsaL, reaction centre subunit XI superfamilyHomologous Superfamily
P [auth L]IPR003757Photosystem I PsaL, reaction centre subunit XIDomain