Annotations: 8J72

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01436	NHL repeat (NHL)	NHL repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	E3 ubiquitin-protein ligase TRIM71	regulatory RNA binding RNA binding binding miRNA binding nucleic acid binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity regulatory RNA binding RNA binding binding miRNA binding nucleic acid binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity translation regulator activity translation repressor activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	regulation of cellular process negative regulation of biological process positive regulation of biological process regulation of miRNA-mediated gene silencing positive regulation of post-transcriptional gene silencing post-transcriptional regulation of gene expression positive regulation of miRNA-mediated gene silencing regulation of gene silencing by regulatory ncRNA negative regulation of cellular process positive regulation of post-transcriptional gene silencing by RNA regulation of post-transcriptional gene silencing by regulatory ncRNA negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of cellular process negative regulation of biological process positive regulation of biological process regulation of miRNA-mediated gene silencing positive regulation of post-transcriptional gene silencing post-transcriptional regulation of gene expression positive regulation of miRNA-mediated gene silencing regulation of gene silencing by regulatory ncRNA negative regulation of cellular process positive regulation of post-transcriptional gene silencing by RNA regulation of post-transcriptional gene silencing by regulatory ncRNA negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process negative regulation of metabolic process biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulatory ncRNA-mediated post-transcriptional gene silencing regulatory ncRNA-mediated gene silencing regulation of gene expression miRNA-mediated post-transcriptional gene silencing negative regulation of gene expression biosynthetic process regulation of post-transcriptional gene silencing negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process post-transcriptional gene silencing regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process cell population proliferation regulation of cell population proliferation neural precursor cell proliferation regulation of neural precursor cell proliferation protein autoubiquitination primary metabolic process protein ubiquitination macromolecule modification protein metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal 3'-UTR-mediated mRNA destabilization regulation of primary metabolic process nucleobase-containing compound metabolic process positive regulation of metabolic process regulation of RNA metabolic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process mRNA catabolic process positive regulation of mRNA metabolic process nucleobase-containing compound catabolic process positive regulation of RNA metabolic process nucleic acid catabolic process catabolic process RNA metabolic process mRNA destabilization macromolecule catabolic process regulation of mRNA catabolic process positive regulation of cellular process RNA destabilization regulation of catabolic process mRNA metabolic process nucleic acid metabolic process positive regulation of catabolic process regulation of mRNA stability positive regulation of mRNA catabolic process regulation of RNA stability regulation of mRNA metabolic process protein biosynthetic process negative regulation of translation miRNA-mediated gene silencing by inhibition of translation negative regulation of protein metabolic process regulation of protein metabolic process translation regulation of translation multicellular organismal process embryonic epithelial tube formation chordate embryonic development tube formation embryo development multicellular organism development epithelial tube formation tube morphogenesis primary neural tube formation embryo development ending in birth or egg hatching anatomical structure development epithelial tube morphogenesis system development developmental process morphogenesis of embryonic epithelium epithelium development neural tube development tube development embryonic morphogenesis morphogenesis of an epithelium nervous system development tissue development anatomical structure morphogenesis tissue morphogenesis neural tube closure neural tube formation anatomical structure formation involved in morphogenesis tube closure stem cell proliferation response to fibroblast growth factor cellular response to stimulus cellular response to growth factor stimulus response to stimulus cell surface receptor signaling pathway signaling response to endogenous stimulus cell surface receptor protein tyrosine kinase signaling pathway cell communication cellular response to endogenous stimulus fibroblast growth factor receptor signaling pathway response to growth factor signal transduction cellular response to fibroblast growth factor stimulus enzyme-linked receptor protein signaling pathway mitotic cell cycle process cell cycle phase transition cell cycle G1/S transition of mitotic cell cycle cell cycle G1/S phase transition mitotic cell cycle mitotic cell cycle phase transition cell cycle process RNA biosynthetic process nucleic acid biosynthetic process RNA processing nucleobase-containing compound biosynthetic process regulatory ncRNA processing miRNA processing	intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm supramolecular complex P-body
C	lncRNA Trincr1	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR011042	Six-bladed beta-propeller, TolB-like	Homologous Superfamily
A, B	IPR001258	NHL repeat	Repeat
A, B	IPR050952	Tripartite Motif and NHL Repeat Containing E3 Ligases	Family
A, B	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A, B	IPR018957	Zinc finger, C3HC4 RING-type	Domain
A, B	IPR017907	Zinc finger, RING-type, conserved site	Conserved Site
A, B	IPR000315	B-box-type zinc finger	Domain
A, B	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A, B	IPR017868	Filamin/ABP280 repeat-like	Repeat
A, B	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B	IPR001841	Zinc finger, RING-type	Domain
A, B	IPR001298	Filamin/ABP280 repeat	Repeat

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.