8J0D

FCP heterodimer, Lhca2, and Lhcf5 together as the M1 side binds to the PSII core in the diatom Thalassiosira pseudonana

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth 3]	PF00504	e8j0d31	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
B [auth 4]	PF00504	e8j0d41	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
C [auth 5]	PF00504	e8j0d51	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)
D [auth 6]	PF00504	e8j0d61	A: extended segments	X: Chlorophyll a-b binding protein (From Topology)	H: Chlorophyll a-b binding protein (From Topology)	T: Chlorophyll a-b binding protein	F: PF00504	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 3]	Fucoxanthin chl a/c protein, lhca clade	chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding	response to light stimulus response to stimulus response to radiation response to abiotic stimulus photosynthesis, light harvesting in photosystem I photosynthesis photosynthesis, light reaction cellular metabolic process photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	membrane cellular anatomical entity membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast protein-containing complex light-harvesting complex intracellular non-membrane-bounded organelle thylakoid membrane cellular anatomical entity membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast protein-containing complex light-harvesting complex intracellular non-membrane-bounded organelle thylakoid non-membrane-bounded organelle
B [auth 4]	Fucoxanthin-chlorophyll a-c binding protein, plastid	chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding	response to light stimulus response to stimulus response to radiation response to abiotic stimulus photosynthesis, light harvesting in photosystem I photosynthesis photosynthesis, light reaction cellular metabolic process photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	membrane cellular anatomical entity membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast protein-containing complex light-harvesting complex intracellular non-membrane-bounded organelle thylakoid membrane cellular anatomical entity membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle chloroplast protein-containing complex light-harvesting complex intracellular non-membrane-bounded organelle thylakoid non-membrane-bounded organelle
C [auth 5]	Fucoxanthin chlorophyll a/c protein 6	chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding	response to light stimulus response to stimulus response to radiation response to abiotic stimulus photosynthesis, light harvesting in photosystem I photosynthesis photosynthesis, light reaction cellular metabolic process photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	membrane cellular anatomical entity membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex light-harvesting complex
D [auth 6]	Fucoxanthin chlorophyll a/c protein 5	chlorophyll binding binding organic cyclic compound binding tetrapyrrole binding	response to light stimulus response to stimulus response to radiation response to abiotic stimulus photosynthesis, light harvesting in photosystem I photosynthesis photosynthesis, light reaction cellular metabolic process photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	membrane cellular anatomical entity membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex light-harvesting complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 3]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
A [auth 3]	IPR022796	Chlorophyll A-B binding protein	Family
B [auth 4]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
B [auth 4]	IPR022796	Chlorophyll A-B binding protein	Family
C [auth 5]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
C [auth 5]	IPR022796	Chlorophyll A-B binding protein	Family
D [auth 6]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
D [auth 6]	IPR022796	Chlorophyll A-B binding protein	Family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth 3], B [auth 4], C [auth 5], D [auth 6]	PDBTM	Annotated as membrane protein by PDBTM

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.