8IYD | pdb_00008iyd

Tail cap of phage lambda tail


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
R [auth K]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
X [auth Q]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
N [auth G]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
H [auth u]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
D [auth U]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
BA [auth W]SCOP2B SuperfamilyPhage tail protein-like 8035093 3001913 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
DA [auth Y]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
E [auth a]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
F [auth b]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
M [auth F]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
T [auth M]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
Z [auth S]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
Y [auth R]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
W [auth P]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
V [auth O]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
U [auth N]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
S [auth L]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
Q [auth J]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
P [auth I]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
O [auth H]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
L [auth E]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
K [auth D]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
J [auth v]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
I [auth V]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
G [auth c]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
CA [auth X]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
AA [auth T]SCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyT6SS-like 8091256 3000580 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
R [auth K]Cullin_ABe8iydK1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
X [auth Q]Cullin_ABe8iydQ1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
N [auth G]Cullin_ABe8iydG1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
H [auth u]Cullin_ABe8iydu1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
D [auth U]Bromodomaine8iydU1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: BromodomainECOD (v294.1)
BA [auth W]Cullin_ABe8iydW1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
CCullin_ABe8iydC1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
DA [auth Y]Cullin_ABe8iydY1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
E [auth a]Cullin_ABe8iyda1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
F [auth b]Cullin_ABe8iydb1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
M [auth F]Cullin_ABe8iydF1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
T [auth M]Cullin_ABe8iydM1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
Z [auth S]Cullin_ABe8iydS1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
Y [auth R]Cullin_ABe8iydR1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
W [auth P]Cullin_ABe8iydP1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
V [auth O]Cullin_ABe8iydO1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
U [auth N]Cullin_ABe8iydN1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
S [auth L]Cullin_ABe8iydL1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
Q [auth J]Cullin_ABe8iydJ1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
P [auth I]Cullin_ABe8iydI1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
O [auth H]Cullin_ABe8iydH1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
L [auth E]Cullin_ABe8iydE1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
K [auth D]Cullin_ABe8iydD1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
J [auth v]Cullin_ABe8iydv1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
I [auth V]Cullin_ABe8iydV1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
G [auth c]Cullin_ABe8iydc1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
CA [auth X]Cullin_ABe8iydX1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
BCullin_ABe8iydB1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
AA [auth T]Cullin_ABe8iydT1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.1)
ABromodomaine8iydA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: BromodomainECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF06141Phage minor tail protein U (Phage_tail_U)Phage minor tail protein UTail fibre component U of bacteriophage. Domain
PF16461Lambda phage tail tube protein, TTP (Phage_TTP_12)Lambda phage tail tube protein, TTPThis family represents the phage-tail-tube protein from a set of Siphoviridae from Gammaproteobacteria. Tail tube proteins polymerise with the assistance of the Tail-tip complex, a tape measure protein and two chaperones. Infectivity of host is deliv ...This family represents the phage-tail-tube protein from a set of Siphoviridae from Gammaproteobacteria. Tail tube proteins polymerise with the assistance of the Tail-tip complex, a tape measure protein and two chaperones. Infectivity of host is delivered through the tube [1]. Members of this family from hexameric ring arrangement [2].
Domain
PF02368Bacterial Ig-like domain (group 2) (Big_2)Bacterial Ig-like domain (group 2)This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Tail tube terminator protein-
Tail tube protein-