8IYA

Complex of SETDB1-derived peptide bound to UBE2E1

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth B]	SCOP2B Superfamily	UBC-like	8059968	3000570	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	UBC-like	8059968	3000570	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	UBC-like	8059968	3000570	SCOP2B (2022-06-29)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A], C	Ubiquitin-conjugating enzyme E2 E1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding ubiquitin conjugating enzyme activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein conjugating enzyme activity transferase activity catalytic activity ubiquitin-protein transferase activity ISG15 transferase activity	organonitrogen compound catabolic process organonitrogen compound metabolic process catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process organic substance metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process protein metabolic process organonitrogen compound catabolic process organonitrogen compound metabolic process catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process organic substance metabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process protein metabolic process macromolecule metabolic process organic substance catabolic process protein polyubiquitination protein ubiquitination macromolecule modification post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal protein K48-linked ubiquitination ISG15-protein conjugation regulation of cellular process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II organic substance biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of transcription by RNA polymerase II regulation of biological process positive regulation of nucleobase-containing compound metabolic process cellular metabolic process regulation of cellular metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process organic cyclic compound metabolic process regulation of gene expression biosynthetic process organic cyclic compound biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process positive regulation of DNA-templated transcription cellular biosynthetic process positive regulation of biological process RNA metabolic process positive regulation of cellular metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of biosynthetic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of biosynthetic process biological regulation regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process positive regulation of RNA biosynthetic process cellular process positive regulation of cellular biosynthetic process	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen protein-containing complex ubiquitin ligase complex catalytic complex transferase complex intracellular protein-containing complex
D, E, F	Histone-lysine N-methyltransferase SETDB1	protein-lysine N-methyltransferase activity histone H3 methyltransferase activity catalytic activity, acting on a protein transferase activity, transferring one-carbon groups histone H3K9 methyltransferase activity transferase activity histone H3K9 trimethyltransferase activity S-adenosylmethionine-dependent methyltransferase activity histone methyltransferase activity lysine N-methyltransferase activity protein methyltransferase activity histone modifying activity N-methyltransferase activity methyltransferase activity catalytic activity protein-lysine N-methyltransferase activity histone H3 methyltransferase activity catalytic activity, acting on a protein transferase activity, transferring one-carbon groups histone H3K9 methyltransferase activity transferase activity histone H3K9 trimethyltransferase activity S-adenosylmethionine-dependent methyltransferase activity histone methyltransferase activity lysine N-methyltransferase activity protein methyltransferase activity histone modifying activity N-methyltransferase activity methyltransferase activity catalytic activity histone H3K9 monomethyltransferase activity protein-containing complex binding chromatin binding binding histone H3K9me2 methyltransferase activity promoter-specific chromatin binding DNA binding organic cyclic compound binding nucleic acid binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	methylation metabolic process protein-DNA complex organization cellular component organization protein-containing complex organization chromatin organization cellular process heterochromatin organization cellular component organization or biogenesis positive regulation of organelle organization regulation of cellular process negative regulation of biological process negative regulation of cellular metabolic process cellular component biogenesis methylation metabolic process protein-DNA complex organization cellular component organization protein-containing complex organization chromatin organization cellular process heterochromatin organization cellular component organization or biogenesis positive regulation of organelle organization regulation of cellular process negative regulation of biological process negative regulation of cellular metabolic process cellular component biogenesis organic substance biosynthetic process regulation of heterochromatin formation regulation of biological process regulation of chromatin organization regulation of DNA methylation-dependent heterochromatin formation cellular metabolic process negative regulation of metabolic process regulation of cellular metabolic process regulation of chromosome organization regulation of organelle organization negative regulation of cellular biosynthetic process positive regulation of chromosome organization regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process regulation of cellular component organization positive regulation of cellular component organization cellular biosynthetic process positive regulation of biological process positive regulation of DNA methylation-dependent heterochromatin formation positive regulation of heterochromatin formation organic substance metabolic process negative regulation of cellular process DNA methylation-dependent heterochromatin formation positive regulation of chromatin organization chromatin remodeling positive regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process heterochromatin formation positive regulation of cellular component biogenesis epigenetic regulation of gene expression biological regulation chromosome organization regulation of macromolecule metabolic process gene expression regulation of cellular component biogenesis macromolecule biosynthetic process regulation of cellular biosynthetic process organelle organization negative regulation of biosynthetic process facultative heterochromatin formation viral life cycle negative regulation of RNA biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process primary metabolic process single stranded viral RNA replication via double stranded DNA intermediate organic cyclic compound metabolic process viral genome replication organic cyclic compound biosynthetic process negative regulation of RNA metabolic process regulation of single stranded viral RNA replication via double stranded DNA intermediate RNA metabolic process negative regulation of single stranded viral RNA replication via double stranded DNA intermediate RNA biosynthetic process nucleic acid biosynthetic process negative regulation of viral process viral RNA genome replication viral process regulation of RNA biosynthetic process negative regulation of viral genome replication nucleobase-containing compound biosynthetic process nucleic acid metabolic process regulation of viral process regulation of viral life cycle regulation of viral genome replication	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle intracellular membrane-bounded organelle cellular anatomical entity cytoplasm nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen intracellular non-membrane-bounded organelle membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle intracellular membrane-bounded organelle cellular anatomical entity cytoplasm nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen intracellular non-membrane-bounded organelle chromosome non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A], C	IPR000608	Ubiquitin-conjugating enzyme E2	Domain
A [auth B], B [auth A], C	IPR016135	Ubiquitin-conjugating enzyme/RWD-like	Homologous Superfamily
A [auth B], B [auth A], C	IPR023313	Ubiquitin-conjugating enzyme, active site	Active Site
D, E, F	IPR040880	Domain of unknown function DUF5604	Domain
D, E, F	IPR007728	Pre-SET domain	Domain
D, E, F	IPR046341	SET domain superfamily	Homologous Superfamily
D, E, F	IPR002999	Tudor domain	Domain
D, E, F	IPR001214	SET domain	Domain
D, E, F	IPR047232	Histone-lysine N-methyltransferase SETDB1/2-like, methyl-CpG binding domains	Domain
D, E, F	IPR003616	Post-SET domain	Domain
D, E, F	IPR016177	DNA-binding domain superfamily	Homologous Superfamily
D, E, F	IPR025796	Histone-lysine N-methyltransferase SETDB1	Family
D, E, F	IPR041291	Histone methyltransferase, Tudor domain 1	Domain
D, E, F	IPR001739	Methyl-CpG DNA binding	Domain
D, E, F	IPR041292	Histone methyltransferase, Tudor domain 2	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth B], B [auth A], C	Pharos: P51965	Arsenic Poisoning juvenile idiopathic arthritis amyotrophic lateral sclerosis myopathy plasma cell myeloma skin disease attention deficit hyperactivity disorder, inattentive type lung cancer ovarian cancer
D, E, F	Pharos: Q15047	melanoma malignant mesothelioma prostate cancer cutaneous melanoma schizophrenia Anhedonia atypical teratoid rhabdoid tumor lung cancer medulloblastoma neuroblastoma osteosarcoma primary hyperoxaluria type 1 squamous cell carcinoma astrocytic tumor malignant ependymoma melanoma malignant mesothelioma prostate cancer cutaneous melanoma schizophrenia Anhedonia atypical teratoid rhabdoid tumor lung cancer medulloblastoma neuroblastoma osteosarcoma primary hyperoxaluria type 1 squamous cell carcinoma astrocytic tumor malignant ependymoma oligodendroglioma ovarian cancer primitive neuroectodermal tumor psoriasis attention deficit hyperactivity disorder, inattentive type large cell medulloblastoma metabolic syndrome X osteoporosis pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.