Cryo-EM structure of Crt-SPARTA-gRNA-tDNA tetramer (NADase active form)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G [auth M] | Cullin_AB | e8it1M1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| E [auth I] | Cullin_AB | e8it1I1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| C [auth E] | Cullin_AB | e8it1E1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
| A | Cullin_AB | e8it1A1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Cullin_AB | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B, D [auth F], F [auth J], H [auth N] | PF13676 | TIR domain (TIR_2) | TIR domain | This is a family of Toll-like receptors. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| J [auth L], L [auth P], N [auth D], P [auth H] | RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3') | - | - | - |
| I [auth K], K [auth O], M [auth C], O [auth G] | DNA (45-mer) | - | - | - |
| B, D [auth F], F [auth J], H [auth N] | TIR domain-containing protein | - | ||
| A, C [auth E], E [auth I], G [auth M] | Piwi domain-containing protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| B, D [auth F], F [auth J], H [auth N] | IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | Domain |
| B, D [auth F], F [auth J], H [auth N] | IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily | Homologous Superfamily |
| A, C [auth E], E [auth I], G [auth M] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
| A, C [auth E], E [auth I], G [auth M] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |
