8INF

human nuclear pre-60S ribosomal particle - State F'


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth 9]SCOP2B Superfamilybeta-beta-alpha zinc fingers8036154 3001077 SCOP2B (2022-06-29)
L [auth B]SCOP2B SuperfamilyTranslational proteins8078351 3000811 SCOP2B (2022-06-29)
M [auth C]SCOP2B SuperfamilyRibosomal protein L29e8053036 3002157 SCOP2B (2022-06-29)
N [auth D]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052831 3002143 SCOP2B (2022-06-29)
N [auth D]SCOP2B SuperfamilyRibosomal protein L48052832 3001146 SCOP2B (2022-06-29)
O [auth E]SCOP2B SuperfamilyL30e-like8077491 3001739 SCOP2B (2022-06-29)
P [auth F]SCOP2B SuperfamilyRibosomal protein L34e-like8053540 3002203 SCOP2B (2022-06-29)
S [auth I]SCOP2B SuperfamilyRibosomal protein L68033688 3000724 SCOP2B (2022-06-29)
T [auth K]SCOP2B SuperfamilyRibosomal protein L36e8053120 3002161 SCOP2B (2022-06-29)
U [auth L]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077123 3001045 SCOP2B (2022-06-29)
W [auth N]SCOP2B SuperfamilyRL5-like8073892 3001709 SCOP2B (2022-06-29)
X [auth O]SCOP2B SuperfamilyRibosomal L38e protein-like8053567 3002206 SCOP2B (2022-06-29)
Y [auth P]SCOP2B SuperfamilyRibosomal protein L39e8095603 3001756 SCOP2B (2022-06-29)
Z [auth Q]SCOP2B SuperfamilyRibosomal protein L13e-like8053155 3002162 SCOP2B (2022-06-29)
BA [auth U]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8098812 3000210 SCOP2B (2022-06-29)
C [auth q]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like8098870 3001911 SCOP2B (2022-06-29)
EA [auth X]SCOP2B SuperfamilyZn-binding ribosomal proteins8101551 3001320 SCOP2B (2022-06-29)
FA [auth Y]SCOP2B SuperfamilyRibosomal protein L228076704 3001078 SCOP2B (2022-06-29)
GA [auth Z]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095977 3001045 SCOP2B (2022-06-29)
KA [auth d]SCOP2B Superfamily60S Ribosomal protein L22e8053060 3002158 SCOP2B (2022-06-29)
LA [auth e]SCOP2B Superfamily50S Ribosomal protein L14-like8072050 3000433 SCOP2B (2022-06-29)
MA [auth g]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095967 3000210 SCOP2B (2022-06-29)
NA [auth h]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076756 3000334 SCOP2B (2022-06-29)
OA [auth i]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053050 3000334 SCOP2B (2022-06-29)
TA [auth n]SCOP2B SuperfamilyTranslational proteins8087455 3000811 SCOP2B (2022-06-29)
UA [auth o]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053100 3000334 SCOP2B (2022-06-29)
UA [auth o]SCOP2B SuperfamilyRibosomal protein L6e N-terminal domain8053099 3002160 SCOP2B (2022-06-29)
VA [auth p]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052922 3002152 SCOP2B (2022-06-29)
VA [auth p]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052923 3001378 SCOP2B (2022-06-29)
WA [auth r]SCOP2B SuperfamilyTranslational machinery components8052887 3000571 SCOP2B (2022-06-29)
DB [auth v]SCOP2B SuperfamilyBRCT domain-like8092279 3000159 SCOP2B (2022-06-29)
I [auth 6]SCOP2B SuperfamilyPentein8098764 3000640 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth u]PF00687e8infu1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
A [auth u]PF00687e8infu2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: PF00687ECOD (1.6)
L [auth B]PF00297e8infB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
M [auth C]PF01779e8infC1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
N [auth D]PF00573e8infD1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
N [auth D]PF14374e8infD2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
O [auth E]PF01248e8infE1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
P [auth F]PF01199e8infF1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
Q [auth G]PF01248e8infG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
R [auth H]PF00831e8infH1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
S [auth I]PF00347e8infI1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
T [auth K]PF01158e8infK1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
U [auth L]PF00828e8infL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
V [auth M]PF01907e8infM1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
W [auth N]PF00281,PF00673e8infN1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
X [auth O]PF01781e8infO1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
Y [auth P]PF00832e8infP1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
Z [auth Q]PF01294e8infQ1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
AA [auth S]PF00467,PF01929e8infS1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
BA [auth U]PF00827e8infU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
CA [auth V]PF00572e8infV1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
C [auth q]PF00687e8infq1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
C [auth q]PF00687e8infq2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: PF00687ECOD (1.6)
DA [auth W]PF00935e8infW1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
EA [auth X]PF01780e8infX1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
FA [auth Y]PF00237e8infY1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
GA [auth Z]PF17135e8infZ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
HA [auth a]PF01280e8infa2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
HA [auth a]PF01280e8infa1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
IA [auth b]F_UNCLASSIFIEDe8infb2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
IA [auth b]PF01775e8infb1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
JA [auth c]PF01157e8infc1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
KA [auth d]PF01776e8infd1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
LA [auth e]PF00238e8infe1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
MA [auth g]PF00276,PF03939e8infg1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
NA [auth h]PF16906e8infh1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
OA [auth i]PF00467,PF01777e8infi1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
PA [auth j]PF01198e8infj1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
QA [auth k]PF01655e8infk1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
RA [auth l]PF01778e8infl1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
SA [auth m]PF00181e8infm1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
SA [auth m]PF03947e8infm2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
TA [auth n]PF01247e8infn1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
UA [auth o]PF01159,PF03868e8info1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
VA [auth p]PF00327,PF08079e8infp1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
WA [auth r]PF14204,PF17144e8infr1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
E [auth 3]PF00327,PF08079e8inf31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
ZA [auth R]PF11176e8infR1 A: alpha arraysX: yeast protein YOR252W (From Topology)H: yeast protein YOR252W (From Topology)T: yeast protein YOR252WF: PF11176ECOD (1.6)
AB [auth J]PF00466e8infJ2 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
AB [auth J]PF17777e8infJ1 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
CB [auth y]PF00298e8infy2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
CB [auth y]PF03946e8infy1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
I [auth 6]PF01912e8inf61 A: a+b duplicates or obligate multimersX: Pentein (From Topology)H: Pentein (From Topology)T: PenteinF: PF01912ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth u]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
J [auth 7]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
K [auth 9]PF12171Zinc-finger double-stranded RNA-binding (zf-C2H2_jaz)Zinc-finger double-stranded RNA-binding- Family
L [auth B]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
M [auth C]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
N [auth D]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
N [auth D]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
O [auth E]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
P [auth F]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
Q [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
R [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
S [auth I]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
B [auth f]PF08158SDA1, HEAT repeat (SDA1_HEAT)SDA1, HEAT repeat- Repeat
B [auth f]PF05285SDA1, conserved domain (SDA1_dom)SDA1, conserved domainThis entry includes SDA1 protein and its homologues. SDA1 is a Saccharomyces cerevisiae protein which is involved in the control of the actin cytoskeleton. The protein is essential for cell viability and is localised in the nucleus [1]. This region i ...This entry includes SDA1 protein and its homologues. SDA1 is a Saccharomyces cerevisiae protein which is involved in the control of the actin cytoskeleton. The protein is essential for cell viability and is localised in the nucleus [1]. This region is found after the HEAT repeats found at SDA1 N-terminal (Pfam:PF08158). According to structure predictions, it consists of short alpha helices and disorder region.
Domain
B [auth f]PF21638SDA1, C-terminal (SDA1_C)SDA1, C-terminalThis entry includes SDA1 protein and its homologues. SDA1 is a Saccharomyces cerevisiae protein which is involved in the control of the actin cytoskeleton. The protein is essential for cell viability [1]. It is a HEAT repeat-containing protein [2], r ...This entry includes SDA1 protein and its homologues. SDA1 is a Saccharomyces cerevisiae protein which is involved in the control of the actin cytoskeleton. The protein is essential for cell viability [1]. It is a HEAT repeat-containing protein [2], required for 60S pre-ribosomal subunits export to the cytoplasm and may also be required for 60S ribosomal subunit maturation and accumulation [3-4]. This entry represents the C-terminal region of SDA1 proteins.
Domain
T [auth K]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
U [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
V [auth M]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
W [auth N]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
W [auth N]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
X [auth O]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
Y [auth P]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
Z [auth Q]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
AA [auth S]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
BA [auth U]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
CA [auth V]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
C [auth q]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
DA [auth W]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
EA [auth X]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
FA [auth Y]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
GA [auth Z]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
HA [auth a]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
IA [auth b]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
JA [auth c]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
KA [auth d]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
LA [auth e]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
MA [auth g]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
MA [auth g]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
D [auth t]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
NA [auth h]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
NA [auth h]PF00467KOW motif (KOW)KOW motif- Family
OA [auth i]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
OA [auth i]PF00467KOW motif (KOW)KOW motif- Family
PA [auth j]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
QA [auth k]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
RA [auth l]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
SA [auth m]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
SA [auth m]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
TA [auth n]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
UA [auth o]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domain- Domain
UA [auth o]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
VA [auth p]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
VA [auth p]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
WA [auth r]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
WA [auth r]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
E [auth 3]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
E [auth 3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
XA [auth z]PF10169Learning-associated protein (Laps)Learning-associated protein- Family
YA [auth A]PF08153NGP1NT (NUC091) domain (NGP1NT)NGP1NT (NUC091) domainThis N terminal domain is found in a subfamily of hypothetical nucleolar GTP-binding proteins similar to human NGP1 [1].Domain
YA [auth A]PF0192650S ribosome-binding GTPase (MMR_HSR1)50S ribosome-binding GTPase- Family
ZA [auth R]PF11176Translation machinery-associated protein 16 (Tma16)Translation machinery-associated protein 16- Family
AB [auth J]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
AB [auth J]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
BB [auth T]PF09495Protein of unknown function (DUF2462) (DUF2462)Protein of unknown function (DUF2462)- Family
CB [auth y]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
CB [auth y]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
DB [auth v]PF06732Pescadillo N-terminus (Pescadillo_N)Pescadillo N-terminus- Family
DB [auth v]PF16589BRCT domain, a BRCA1 C-terminus domain (BRCT_2)BRCT domain, a BRCA1 C-terminus domain- Family
FB [auth 1]PF17719Family of unknown function (DUF5564) (DUF5564)Family of unknown function (DUF5564)- Family
GB [auth s]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
HB [auth w]PF07767Nop53 (60S ribosomal biogenesis) (Nop53)Nop53 (60S ribosomal biogenesis)- Family
G [auth 4]PF08155NOGCT (NUC087) domain (NOGCT)NOGCT (NUC087) domainThis C terminal domain is found in the NOG subfamily of nucleolar GTP-binding proteins [1].Domain
G [auth 4]PF17835NOG1 N-terminal helical domain (NOG1_N)NOG1 N-terminal helical domainThis domain is found at the N-terminus of NOG1 GTPase proteins.Domain
G [auth 4]PF06858Nucleolar GTP-binding protein 1 (NOG1) (NOG1)Nucleolar GTP-binding protein 1 (NOG1)- Family
I [auth 6]PF01912eIF-6 family (eIF-6)eIF-6 family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth u]Ribosomal L1 domain-containing protein 1
J [auth 7]Probable ribosome biogenesis protein RLP24
K [auth 9]Zinc finger protein 593
L [auth B]60S ribosomal protein L3
M [auth C]60S ribosomal protein L29
N [auth D]60S ribosomal protein L4
O [auth E]60S ribosomal protein L30
P [auth F]60S ribosomal protein L34
Q [auth G]60S ribosomal protein L7a
R [auth H]60S ribosomal protein L35
S [auth I]60S ribosomal protein L9
B [auth f]Protein SDA1 homolog-
T [auth K]60S ribosomal protein L36
U [auth L]60S ribosomal protein L27a
V [auth M]60S ribosomal protein L37
W [auth N]60S ribosomal protein L11
X [auth O]60S ribosomal protein L38
Y [auth P]60S ribosomal protein L39
Z [auth Q]60S ribosomal protein L13
AA [auth S]60S ribosomal protein L14
BA [auth U]60S ribosomal protein L15
CA [auth V]60S ribosomal protein L13a
C [auth q]60S ribosomal protein L10a
DA [auth W]60S ribosomal protein L36a
EA [auth X]60S ribosomal protein L37a
FA [auth Y]60S ribosomal protein L17
GA [auth Z]60S ribosomal protein L18
HA [auth a]60S ribosomal protein L19
IA [auth b]60S ribosomal protein L18a
JA [auth c]60S ribosomal protein L21
KA [auth d]60S ribosomal protein L22
LA [auth e]60S ribosomal protein L23
MA [auth g]60S ribosomal protein L23a
D [auth t]MKI67 FHA domain-interacting nucleolar phosphoprotein
NA [auth h]60S ribosomal protein L26
OA [auth i]60S ribosomal protein L27
PA [auth j]60S ribosomal protein L31
QA [auth k]60S ribosomal protein L32
RA [auth l]60S ribosomal protein L28
SA [auth m]60S ribosomal protein L8
TA [auth n]60S ribosomal protein L35a
UA [auth o]60S ribosomal protein L6
VA [auth p]60S ribosomal protein L7
WA [auth r]60S ribosomal protein L5
E [auth 3]60S ribosomal protein L7-like 1
XA [auth z]Protein LLP homolog
YA [auth A]G Protein Nucleolar 2
ZA [auth R]Translation machinery-associated protein 16
AB [auth J]mRNA turnover protein 4 homolog
BB [auth T]Leydig cell tumor 10 kDa protein homolog- - -
CB [auth y]60S ribosomal protein L12
DB [auth v]Pescadillo homolog
EB [auth 8]5.8S rRNA---
FB [auth 1]Uncharacterized protein C11orf98- - -
GB [auth s]Ribosome biogenesis protein NSA2 homolog
F [auth 2]28S rRNA---
HB [auth w]Ribosome biogenesis protein NOP53
IB [auth x]Internal Transcribed Spacer 2---
G [auth 4]GTP-binding protein 4
H [auth 5]5S rRNA---
I [auth 6]Eukaryotic translation initiation factor 6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth u]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
A [auth u]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
A [auth u]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
J [auth 7]IPR023438Large ribosomal subunit protein eL24Family
J [auth 7]IPR011017TRASH domainDomain
J [auth 7]IPR000988Large ribosomal subunit protein eL24-relatedFamily
J [auth 7]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
J [auth 7]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
K [auth 9]IPR003604Matrin/U1-C-like, C2H2-type zinc fingerDomain
K [auth 9]IPR013087Zinc finger C2H2-typeDomain
K [auth 9]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
K [auth 9]IPR022755Zinc finger, double-stranded RNA bindingDomain
L [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
L [auth B]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
L [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
L [auth B]IPR000597Large ribosomal subunit protein uL3Family
L [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
M [auth C]IPR002673Large ribosomal subunit protein eL29Family
N [auth D]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
N [auth D]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
N [auth D]IPR002136Large ribosomal subunit protein uL4Family
N [auth D]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
N [auth D]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
O [auth E]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
O [auth E]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
O [auth E]IPR000231Large ribosomal subunit protein eL30Family
O [auth E]IPR039109Large ribosomal subunit protein eL30-likeFamily
O [auth E]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
P [auth F]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
P [auth F]IPR008195Large ribosomal subunit protein eL34Family
Q [auth G]IPR001921Large ribosomal subunit protein eL8Family
Q [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
Q [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
Q [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
Q [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
R [auth H]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
R [auth H]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
R [auth H]IPR001854Large ribosomal subunit protein uL29Family
R [auth H]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
S [auth I]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
S [auth I]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
S [auth I]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
S [auth I]IPR000702Large ribosomal subunit protein uL6-likeFamily
B [auth f]IPR048292SDA1, C-terminal domainDomain
B [auth f]IPR016024Armadillo-type foldHomologous Superfamily
B [auth f]IPR007949SDA1, middle domainDomain
B [auth f]IPR027312Sda1Family
B [auth f]IPR012977SDA1, N-terminalDomain
T [auth K]IPR000509Large ribosomal subunit protein eL36Family
T [auth K]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
U [auth L]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
U [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
U [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
U [auth L]IPR030878Large ribosomal subunit protein uL15Family
U [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
V [auth M]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
V [auth M]IPR001569Large ribosomal subunit protein eL37Family
V [auth M]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
V [auth M]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
W [auth N]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
W [auth N]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
W [auth N]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
W [auth N]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
W [auth N]IPR002132Large ribosomal subunit protein uL5Family
X [auth O]IPR002675Large ribosomal subunit protein eL38Family
X [auth O]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
Y [auth P]IPR000077Large ribosomal subunit protein eL39Family
Y [auth P]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
Y [auth P]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
Z [auth Q]IPR001380Large ribosomal subunit protein eL13Family
Z [auth Q]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
AA [auth S]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth S]IPR039660Large ribosomal subunit protein eL14Family
AA [auth S]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
AA [auth S]IPR002784Large ribosomal subunit protein eL14 domainDomain
BA [auth U]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
BA [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
BA [auth U]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
BA [auth U]IPR000439Large ribosomal subunit protein eL15Family
CA [auth V]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
CA [auth V]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
CA [auth V]IPR005822Large ribosomal subunit protein uL13Family
CA [auth V]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
C [auth q]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
C [auth q]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
C [auth q]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
C [auth q]IPR002143Large ribosomal subunit protein uL1Family
C [auth q]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
DA [auth W]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth W]IPR000552Large ribosomal subunit protein eL42Family
EA [auth X]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
EA [auth X]IPR002674Large ribosomal subunit protein eL43Family
EA [auth X]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth Y]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
FA [auth Y]IPR001063Large ribosomal subunit protein uL22Family
FA [auth Y]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
FA [auth Y]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
GA [auth Z]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
GA [auth Z]IPR000039Large ribosomal subunit protein eL18Family
GA [auth Z]IPR021131Large ribosomal subunit protein uL15/eL18Domain
GA [auth Z]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
HA [auth a]IPR039547Large ribosomal subunit protein eL19Family
HA [auth a]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
HA [auth a]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
HA [auth a]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
HA [auth a]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
HA [auth a]IPR000196Large ribosomal subunit protein eL19 domainDomain
IA [auth b]IPR028877Large ribosomal subunit protein eL20Family
IA [auth b]IPR023573Large ribosomal subunit protein eL20 domainDomain
IA [auth b]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
JA [auth c]IPR001147Large ribosomal subunit protein eL21Family
JA [auth c]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JA [auth c]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
JA [auth c]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
KA [auth d]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
KA [auth d]IPR002671Large ribosomal subunit protein eL22Family
LA [auth e]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
LA [auth e]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
LA [auth e]IPR000218Large ribosomal subunit protein uL14Family
MA [auth g]IPR019985Large ribosomal subunit protein uL23Family
MA [auth g]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
MA [auth g]IPR013025Large ribosomal subunit protein uL23-likeFamily
MA [auth g]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
MA [auth g]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
MA [auth g]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
D [auth t]IPR021043MKI67 FHA domain-interacting nucleolar phosphoprotein, FHA Ki67 bindingDomain
D [auth t]IPR000504RNA recognition motif domainDomain
D [auth t]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
D [auth t]IPR035979RNA-binding domain superfamilyHomologous Superfamily
NA [auth h]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NA [auth h]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
NA [auth h]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
NA [auth h]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth h]IPR005824KOWDomain
NA [auth h]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
OA [auth i]IPR001141Large ribosomal subunit protein eL27Family
OA [auth i]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
OA [auth i]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
OA [auth i]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
OA [auth i]IPR005824KOWDomain
OA [auth i]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
PA [auth j]IPR000054Large ribosomal subunit protein eL31Family
PA [auth j]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
PA [auth j]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
QA [auth k]IPR001515Large ribosomal subunit protein eL32Family
QA [auth k]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
QA [auth k]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
RA [auth l]IPR029004Ribosomal eL28/Mak16Domain
RA [auth l]IPR002672Large ribosomal subunit protein eL28Family
SA [auth m]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
SA [auth m]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
SA [auth m]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
SA [auth m]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
SA [auth m]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
SA [auth m]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SA [auth m]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
SA [auth m]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
SA [auth m]IPR002171Large ribosomal subunit protein uL2Family
TA [auth n]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
TA [auth n]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
TA [auth n]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
TA [auth n]IPR001780Large ribosomal subunit protein eL33Family
UA [auth o]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
UA [auth o]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
UA [auth o]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
UA [auth o]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
UA [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
UA [auth o]IPR000915Large ribosomal subunit protein eL6Family
VA [auth p]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
VA [auth p]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
VA [auth p]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
VA [auth p]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
VA [auth p]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
VA [auth p]IPR039699Large ribosomal subunit protein uL30Family
VA [auth p]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
WA [auth r]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
WA [auth r]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
E [auth 3]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
E [auth 3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
E [auth 3]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
E [auth 3]IPR039699Large ribosomal subunit protein uL30Family
E [auth 3]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
E [auth 3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
E [auth 3]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
XA [auth z]IPR018784Learning associated protein 18-likeFamily
YA [auth A]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
YA [auth A]IPR024929Nucleolar GTP-binding protein 2, circularly permuted GTPase motifDomain
YA [auth A]IPR006073GTP binding domainDomain
YA [auth A]IPR012971Nucleolar GTP-binding protein 2, N-terminal domainDomain
YA [auth A]IPR023179GTP-binding protein, orthogonal bundle domain superfamilyHomologous Superfamily
YA [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
ZA [auth R]IPR038356Tma16 superfamilyHomologous Superfamily
ZA [auth R]IPR021346Translation machinery-associated protein 16Family
AB [auth J]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
AB [auth J]IPR001790Large ribosomal subunit protein uL10Family
AB [auth J]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
AB [auth J]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
AB [auth J]IPR033867Ribosome assembly factor Mrt4Family
BB [auth T]IPR019034Uncharacterised protein family UPF0390Family
CB [auth y]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
CB [auth y]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
CB [auth y]IPR000911Ribosomal protein uL11Family
CB [auth y]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
CB [auth y]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
CB [auth y]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
DB [auth v]IPR010613PescadilloFamily
DB [auth v]IPR001357BRCT domainDomain
DB [auth v]IPR036420BRCT domain superfamilyHomologous Superfamily
FB [auth 1]IPR037691Uncharacterized protein C11orf98Family
GB [auth s]IPR039411Ribosomal biogenesis NSA2 familyFamily
GB [auth s]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
HB [auth w]IPR011687Ribosome biogenesis protein Nop53/GLTSCR2Family
G [auth 4]IPR024926Nucleolar GTP-binding protein 1Family
G [auth 4]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
G [auth 4]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
G [auth 4]IPR012973NOG, C-terminalDomain
G [auth 4]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
G [auth 4]IPR041623NOG1, N-terminal helical domainDomain
G [auth 4]IPR005225Small GTP-binding protein domainDomain
G [auth 4]IPR006073GTP binding domainDomain
I [auth 6]IPR002769Translation initiation factor IF6Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth u]PharosO76021
J [auth 7]PharosQ9UHA3
K [auth 9]PharosO00488
L [auth B]PharosP39023
N [auth D]PharosP36578
O [auth E]PharosP62888
P [auth F]PharosP49207
Q [auth G]PharosP62424
R [auth H]PharosP42766
S [auth I]PharosP32969
B [auth f]PharosQ9NVU7
T [auth K]PharosQ9Y3U8
U [auth L]PharosP46776
V [auth M]PharosP61927
W [auth N]PharosP62913
X [auth O]PharosP63173
Z [auth Q]PharosP26373
AA [auth S]PharosP50914
BA [auth U]PharosP61313
CA [auth V]PharosP40429
C [auth q]PharosP62906
DA [auth W]PharosP83881
EA [auth X]PharosP61513
FA [auth Y]PharosP18621
GA [auth Z]PharosQ07020
HA [auth a]PharosP84098
JA [auth c]PharosP46778
KA [auth d]PharosP35268
LA [auth e]PharosP62829
MA [auth g]PharosP62750
D [auth t]PharosQ9BYG3
NA [auth h]PharosP61254
OA [auth i]PharosP61353
PA [auth j]PharosP62899
QA [auth k]PharosP62910
RA [auth l]PharosP46779
TA [auth n]PharosP18077
UA [auth o]PharosQ02878
VA [auth p]PharosP18124
WA [auth r]PharosP46777
E [auth 3]PharosQ6DKI1
XA [auth z]PharosQ9BRT6
YA [auth A]PharosQ13823
ZA [auth R]PharosQ96EY4
AB [auth J]PharosQ9UKD2
BB [auth T]PharosQ9UNZ5
CB [auth y]PharosP30050
DB [auth v]PharosO00541
GB [auth s]PharosO95478
HB [auth w]PharosQ9NZM5
G [auth 4]PharosQ9BZE4
I [auth 6]PharosP56537