8IN8 | pdb_00008in8

Cryo-EM structure of the target ssDNA-bound SIR2-APAZ/Ago-gRNA quaternary complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth C]LNT_Ne8in8C1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: LNT_NECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth C]3.30.420.10 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth J]DNA (5'-D(P*AP*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*A)-3')---
C [auth I]RNA (5'-R(P*AP*UP*AP*AP*UP*GP*GP*UP*UP*UP*CP*UP*UP*AP*GP*AP*CP*GP*UP*CP*GP*UP*UP*U)-3')---
B [auth C]Piwi domain protein - -
A [auth B]Sir2 superfamily protein- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth C]IPR036397Ribonuclease H superfamilyHomologous Superfamily
B [auth C]IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
A [auth B]IPR029035DHS-like NAD/FAD-binding domain superfamilyHomologous Superfamily