8IMO | pdb_00008imo

Rt1'I-Rt1'II, Rt2I-Rt2II, Rt3'I-Rt3'II cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster G)

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
NA [auth m]	Cullin_AB	e8imom1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
N [auth M]	Cullin_AB	e8imoM1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
AA [auth Z]	Cullin_AB	e8imoZ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
Z [auth Y]	Cullin_AB	e8imoY1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
Y [auth X]	Cullin_AB	e8imoX1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
X [auth W]	Cullin_AB	e8imoW1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
W [auth V]	Cullin_AB	e8imoV1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
V [auth U]	Cullin_AB	e8imoU1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
U [auth T]	Cullin_AB	e8imoT1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
MA [auth l]	Cullin_AB	e8imol1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
M [auth L]	Cullin_AB	e8imoL1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
LA [auth k]	Cullin_AB	e8imok1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
L [auth K]	Cullin_AB	e8imoK1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
KA [auth j]	Cullin_AB	e8imoj1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
K [auth J]	Cullin_AB	e8imoJ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
JA [auth i]	Cullin_AB	e8imoi1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
J [auth I]	Cullin_AB	e8imoI1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
IA [auth h]	Cullin_AB	e8imoh1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
I [auth H]	Cullin_AB	e8imoH1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
HA [auth g]	Cullin_AB	e8imog1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
H [auth G]	Cullin_AB	e8imoG1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
T [auth S]	Cullin_AB	e8imoS1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
S [auth R]	Cullin_AB	e8imoR1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
R [auth Q]	Cullin_AB	e8imoQ1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
Q [auth P]	Cullin_AB	e8imoP1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
P [auth O]	Cullin_AB	e8imoO1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
O [auth N]	Cullin_AB	e8imoN1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
GA [auth f]	Cullin_AB	e8imof1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
G [auth F]	Cullin_AB	e8imoF1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
FA [auth e]	Cullin_AB	e8imoe1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
F [auth E]	Cullin_AB	e8imoE1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
EA [auth d]	Cullin_AB	e8imod1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
E [auth D]	Cullin_AB	e8imoD1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
DA [auth c]	Cullin_AB	e8imoc1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
D [auth C]	Cullin_AB	e8imoC1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
CA [auth b]	Cullin_AB	e8imob1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
C [auth B]	Cullin_AB	e8imoB1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
BA [auth a]	Cullin_AB	e8imoa1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)
B [auth A]	Cullin_AB	e8imoA1	A: a/b three-layered sandwiches	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth Z], N [auth M], NA [auth m]	CpcD	-	-	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], JA [auth i], K [auth J], KA [auth j], L [auth K], LA [auth k], M [auth L], MA [auth l], U [auth T], V [auth U], W [auth V], X [auth W], Y [auth X], Z [auth Y]	CpcB	-	photosynthesis metabolic process cellular process	protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane phycobilisome thylakoid
B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], DA [auth c], E [auth D], EA [auth d], F [auth E], FA [auth e], G [auth F], GA [auth f], O [auth N], P [auth O], Q [auth P], R [auth Q], S [auth R], T [auth S]	CpcA	-	photosynthesis metabolic process cellular process	protein-containing complex intracellular anatomical structure membrane membrane protein complex intracellular membraneless organelle light-harvesting complex thylakoid membrane intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane phycobilisome thylakoid
A [auth 5]	CpcN	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth Z], N [auth M], NA [auth m]	IPR008213	CpcD-like domain	Domain
H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], JA [auth i], K [auth J], KA [auth j], L [auth K], LA [auth k], M [auth L], MA [auth l], U [auth T], V [auth U], W [auth V], X [auth W], Y [auth X], Z [auth Y]	IPR012128	Phycobilisome, alpha/beta subunit	Family
B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], DA [auth c], E [auth D], EA [auth d], F [auth E], FA [auth e], G [auth F], GA [auth f], O [auth N], P [auth O], Q [auth P], R [auth Q], S [auth R], T [auth S]	IPR012128	Phycobilisome, alpha/beta subunit	Family
A [auth 5]	IPR001297	Phycobilisome linker domain	Domain
A [auth 5]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily

Prepare Data

Validate Data

Deposit Data

Help and Resources

.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 8IMO | pdb_00008imo

Rt1'I-Rt1'II, Rt2I-Rt2II, Rt3'I-Rt3'II cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster G)

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

8IMO | pdb_00008imo