8IAI | pdb_00008iai

Structure of mammalian spectrin-actin junctional complex of membrane skeleton, State II, Global map


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BA [auth U]F_UNCLASSIFIEDe8iaiU1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: F_UNCLASSIFIEDECOD (1.6)
EA [auth Z]F_UNCLASSIFIEDe8iaiZ1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: F_UNCLASSIFIEDECOD (1.6)
CA [auth V]F_UNCLASSIFIEDe8iaiV1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: F_UNCLASSIFIEDECOD (1.6)
AA [auth T]F_UNCLASSIFIEDe8iaiT1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: F_UNCLASSIFIEDECOD (1.6)
U [auth N]F_UNCLASSIFIEDe8iaiN1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: F_UNCLASSIFIEDECOD (1.6)
V [auth O]F_UNCLASSIFIEDe8iaiO1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: F_UNCLASSIFIEDECOD (1.6)
W [auth P]F_UNCLASSIFIEDe8iaiP1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: F_UNCLASSIFIEDECOD (1.6)
Y [auth R]F_UNCLASSIFIEDe8iaiR1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: F_UNCLASSIFIEDECOD (1.6)
Z [auth S]F_UNCLASSIFIEDe8iaiS1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: F_UNCLASSIFIEDECOD (1.6)
X [auth Q]F_UNCLASSIFIEDe8iaiQ1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: F_UNCLASSIFIEDECOD (1.6)
T [auth M]F_UNCLASSIFIEDe8iaiM1 A: alpha bundlesX: CH domain-likeH: Calponin-homology domain-like (From Topology)T: Calponin-homology domain-likeF: F_UNCLASSIFIEDECOD (1.6)
I [auth A]F_UNCLASSIFIEDe8iaiA1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
J [auth B]F_UNCLASSIFIEDe8iaiB1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
K [auth C]F_UNCLASSIFIEDe8iaiC2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
L [auth D]F_UNCLASSIFIEDe8iaiD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
M [auth E]F_UNCLASSIFIEDe8iaiE2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
N [auth F]F_UNCLASSIFIEDe8iaiF1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
O [auth G]F_UNCLASSIFIEDe8iaiG1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
P [auth H]F_UNCLASSIFIEDe8iaiH2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
Q [auth I]F_UNCLASSIFIEDe8iaiI1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
R [auth J]F_UNCLASSIFIEDe8iaiJ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
S [auth K]F_UNCLASSIFIEDe8iaiK2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
CA [auth V]PF00261Tropomyosin (Tropomyosin)Tropomyosin- Coiled-coil
PF00307Calponin homology (CH) domain (CH)Calponin homology (CH) domainThe CH domain is found in both cytoskeletal proteins and signal transduction proteins [1]. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its ac ...The CH domain is found in both cytoskeletal proteins and signal transduction proteins [1]. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity [4]. Most member proteins have from two to four copies of the CH domain, however some proteins such as calponin and Swiss:P15498 have only a single copy.
Domain
PF00022Actin (Actin)Actin- Family
E [auth 5],
F [auth 6],
G [auth 7]
PF16182Putative adherens-junction anchoring region of AbLIM (AbLIM_anchor)Putative adherens-junction anchoring region of AbLIM- Family
C [auth 3],
D [auth 4]
PF00596Class II Aldolase and Adducin N-terminal domain (Aldolase_II)Class II Aldolase and Adducin N-terminal domainThis family includes class II aldolases and adducins which have not been ascribed any enzymatic function. Domain
A [auth 1],
B [auth 2],
H [auth 9]
PF00596Class II Aldolase and Adducin N-terminal domain (Aldolase_II)Class II Aldolase and Adducin N-terminal domainThis family includes class II aldolases and adducins which have not been ascribed any enzymatic function. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
BA [auth U]Tropomyosin-1.9 -
DA [auth Y]Tropomodulin-1
EA [auth Z]SH3 domain-binding glutamic acid-rich-like protein -
CA [auth V]Tropomyosin 3 -
Spectrin beta chain
Actin, cytoplasmic 1
E [auth 5],
F [auth 6],
G [auth 7]
Dematin actin binding protein
C [auth 3],
D [auth 4]
Beta-adducin
A [auth 1],
B [auth 2],
H [auth 9]
Adducin 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
BA [auth U]IPR014751DNA repair protein XRCC4-like, C-terminalHomologous Superfamily
BA [auth U]IPR000533TropomyosinFamily
DA [auth Y]IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
DA [auth Y]IPR004934TropomodulinFamily
EA [auth Z]IPR051033SH3 domain-binding glutamic acid-rich proteinFamily
EA [auth Z]IPR006993SH3-binding, glutamic acid-rich proteinFamily
EA [auth Z]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
CA [auth V]IPR014751DNA repair protein XRCC4-like, C-terminalHomologous Superfamily
CA [auth V]IPR000533TropomyosinFamily
IPR001589Actinin-type actin-binding domain, conserved siteConserved Site
IPR036872CH domain superfamilyHomologous Superfamily
IPR001715Calponin homology domainDomain
IPR018159Spectrin/alpha-actininRepeat
IPR016343Spectrin, beta subunitFamily
IPR002017Spectrin repeatRepeat
IPR020902Actin/actin-like conserved siteConserved Site
IPR004001Actin, conserved siteConserved Site
IPR043129ATPase, nucleotide binding domainHomologous Superfamily
IPR004000Actin familyFamily
E [auth 5],
F [auth 6],
G [auth 7]
IPR032402Putative adherens-junction anchoring domainDomain
E [auth 5],
F [auth 6],
G [auth 7]
IPR003128Villin headpieceDomain
E [auth 5],
F [auth 6],
G [auth 7]
IPR051618Actin-binding LIMFamily
E [auth 5],
F [auth 6],
G [auth 7]
IPR036886Villin headpiece domain superfamilyHomologous Superfamily
C [auth 3],
D [auth 4]
IPR051017Aldolase class II Adducin subfamilyFamily
C [auth 3],
D [auth 4]
IPR036409Class II aldolase/adducin N-terminal domain superfamilyHomologous Superfamily
C [auth 3],
D [auth 4]
IPR001303Class II aldolase/adducin N-terminalDomain
A [auth 1],
B [auth 2],
H [auth 9]
IPR051017Aldolase class II Adducin subfamilyFamily
A [auth 1],
B [auth 2],
H [auth 9]
IPR036409Class II aldolase/adducin N-terminal domain superfamilyHomologous Superfamily
A [auth 1],
B [auth 2],
H [auth 9]
IPR001303Class II aldolase/adducin N-terminalDomain