Omicron spike variant XBB with n3130v-Fc
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | Coronavirus S1 glycoprotein domain D-like | 8092663 | 3002616 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8092469 | 3000120 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Coronavirus S1 glycoprotein domain C-like | 8092661 | 3002615 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8092467 | 3001706 | SCOP2B (2022-06-29) |
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|
B [auth C] | Heavy Chain | IGHV3 | - | spike glycoprotein | SAbDab (2024-05-10) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
| Spike glycoprotein | | | |
B [auth C] | n3130v-Fc | - | - | - |
Chains | Accession | Name | Type |
---|
| IPR044873 | Spike glycoprotein S2, coronavirus, heptad repeat 1 | Domain |
| IPR044366 | Spike (S) protein S1 subunit, receptor-binding domain, SARS-CoV-2 | Domain |
| IPR018548 | Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus | Domain |
| IPR044341 | Spike (S) protein S1 subunit, N-terminal domain, SARS-CoV-like | Domain |
| IPR032500 | Spike glycoprotein S1, N-terminal domain, betacoronavirus-like | Domain |
| IPR042578 | Spike glycoprotein, betacoronavirus | Family |
| IPR036326 | Spike S1 subunit, receptor binding domain superfamily, betacoronavirus | Homologous Superfamily |
| IPR043002 | Spike glycoprotein, N-terminal domain superfamily | Homologous Superfamily |
| IPR044874 | Spike glycoprotein S2, coronavirus, heptad repeat 2 | Domain |
| IPR043473 | Spike glycoprotein S2 superfamily, coronavirus | Homologous Superfamily |
| IPR043607 | Coronavirus spike glycoprotein S1, C-terminal | Domain |
| IPR002552 | Spike glycoprotein S2, coronavirus | Domain |