8HQN | pdb_00008hqn

Activation mechanism of GPR132 by 9(S)-HODE


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth A]SCOP2B SuperfamilyRas-like P-loop GTPases 8056779 3002022 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth A]MIF4Ge8hqnA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
D [auth R]MIF4Ge8hqnR1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
C [auth H]Cullin_ABe8hqnH1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.2)
B [auth C]Cullin_ABe8hqnC1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.2)
A [auth B]Cullin_ABe8hqnB1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth A]PF00503G-protein alpha subunit (G-alpha)G-protein alpha subunitG proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like ...G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like family form a ring of residues centered on the nucleotide binding site [3]. A Ggamma is found fused to an inactive Galpha in the Dictyostelium protein gbqA [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth A]Guanine nucleotide-binding protein G(i) subunit alpha-1
D [auth R]Soluble cytochrome b562,Probable G-protein coupled receptor 132
C [auth H]scFv16---
B [auth C]Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
A [auth B]Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E [auth A]P63096
B [auth C]P59768
A [auth B]P62873

Membrane Protein Annotation: PDBTM PDBTM Database Homepage