8HP9
Cryo-EM structure of SARS-CoV-2 Omicron BA.2 S-trimer in complex with fab L4.65 and L5.34
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Coronavirus S2 glycoprotein stalk-like | 8092471 | 3000282 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8092469 | 3000120 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Coronavirus spike S2 glycoprotein connector domain-like | 8092473 | 3002562 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Coronavirus S1 glycoprotein domain C-like | 8092661 | 3002615 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8092467 | 3001706 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8092469 | 3000120 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | Coronavirus spike S2 glycoprotein connector domain-like | 8092473 | 3002562 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | Coronavirus S1 glycoprotein domain C-like | 8092661 | 3002615 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8092467 | 3001706 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | Coronavirus S2 glycoprotein stalk-like | 8092471 | 3000282 | SCOP2B (2022-06-29) |
K [auth C] | SCOP2B Superfamily | Coronavirus S2 glycoprotein stalk-like | 8092471 | 3000282 | SCOP2B (2022-06-29) |
K [auth C] | SCOP2B Superfamily | Coronavirus S1 glycoprotein domain C-like | 8092661 | 3002615 | SCOP2B (2022-06-29) |
K [auth C] | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8092469 | 3000120 | SCOP2B (2022-06-29) |
K [auth C] | SCOP2B Superfamily | Coronavirus spike S2 glycoprotein connector domain-like | 8092473 | 3002562 | SCOP2B (2022-06-29) |
K [auth C] | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8092467 | 3001706 | SCOP2B (2022-06-29) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth L], H [auth Q], M [auth J] | Light Chain | IGKV3 | Kappa | spike protein s2' | SAbDab (2024-05-10) |
C [auth H], G [auth P], L [auth I] | Heavy Chain | IGHV2 | - | spike protein s2' | SAbDab (2024-05-10) |
D [auth M], I [auth E], N [auth K] | Heavy Chain | IGHV3 | - | spike protein s2' | SAbDab (2024-05-10) |
E [auth N], J [auth F], O | Light Chain | IGKV1 | Kappa | spike protein s2' | SAbDab (2024-05-10) |