8HNK | pdb_00008hnk

CXCR3-DNGi complex activated by CXCL11


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth G]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)
E [auth L]SCOP2B SuperfamilyInterleukin 8-like chemokines 8040726 3001955 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRas-like P-loop GTPases 8056779 3002022 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
E [auth L]PF00048Small cytokines (intecrine/chemokine), interleukin-8 like (IL8)Small cytokines (intecrine/chemokine), interleukin-8 likeIncludes a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity. Structure contains two highly conserved disulfide bonds. Domain
D [auth R]PF000017 transmembrane receptor (rhodopsin family) (7tm_1)7 transmembrane receptor (rhodopsin family)This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GC ...This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins [1].
Domain
PF00503G-protein alpha subunit (G-alpha)G-protein alpha subunitG proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like ...G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like family form a ring of residues centered on the nucleotide binding site [3]. A Ggamma is found fused to an inactive Galpha in the Dictyostelium protein gbqA [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
C [auth G]Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
E [auth L]C-X-C motif chemokine 11
F [auth S]single-chain variable fragment scFv16---
D [auth R]Soluble cytochrome b562,C-X-C chemokine receptor type 3,Oplophorus-luciferin 2-monooxygenase catalytic subunit
Guanine nucleotide-binding protein G(i) subunit alpha-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR019775WD40 repeat, conserved siteConserved Site
IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
IPR001632G-protein beta subunit-like, WD40 repeatsDomain
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR016346G-protein subunit beta 1-5Family
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR001680WD40 repeatRepeat
C [auth G]IPR001770G-protein, gamma subunitFamily
C [auth G]IPR015898G-protein, gamma subunit-like domainDomain
C [auth G]IPR036284G-protein gamma-like domain superfamilyHomologous Superfamily
E [auth L]IPR001811Chemokine interleukin-8-like domainDomain
E [auth L]IPR036048Chemokine interleukin-8-like superfamilyHomologous Superfamily
E [auth L]IPR001089CXC chemokineFamily
E [auth L]IPR039809Chemokine beta/gamma/deltaFamily
E [auth L]IPR033899CXC Chemokine domainDomain
E [auth L]IPR018048CXC chemokine, conserved siteConserved Site
D [auth R]IPR010980Cytochrome c/b562Homologous Superfamily
D [auth R]IPR009155Cytochrome b562Family
D [auth R]IPR004070CXC chemokine receptor 3Family
D [auth R]IPR000276G protein-coupled receptor, rhodopsin-likeFamily
D [auth R]IPR017452GPCR, rhodopsin-like, 7TMDomain
D [auth R]IPR000355Chemokine receptor familyFamily
D [auth R]IPR050119C-C chemokine receptor type 1-9-likeFamily
D [auth R]IPR012674CalycinHomologous Superfamily
IPR001019Guanine nucleotide binding protein (G-protein), alpha subunitFamily
IPR011025G protein alpha subunit, helical insertionHomologous Superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR001408G-protein alpha subunit, group IFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP62873
C [auth G]PharosP59768
E [auth L]PharosO14625
D [auth R]PharosP49682
PharosP63096

Membrane Protein Annotation: PDBTM PDBTM Database Homepage