8HL2

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
PA [auth AL1P]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like8043918 3001911 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth ALX0]PF01775e8hl2ALX01 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
K [auth L10E]PF00252e8hl2L10E1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
L [auth L13P]PF00572e8hl2L13P1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
M [auth L141]PF00467e8hl2L1411 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467ECOD (1.6)
N [auth L142]PF00467e8hl2L1421 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467ECOD (1.6)
O [auth L14P]PF00238e8hl2L14P1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
P [auth L15E]PF00827e8hl2L15E1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
Q [auth L18E]PF00828e8hl2L18E1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
R [auth L18P]PF17144e8hl2L18P1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF17144ECOD (1.6)
S [auth L19E]PF01280e8hl2L19E1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
S [auth L19E]PF01280e8hl2L19E2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
T [auth L22P]PF00237e8hl2L22P1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
U [auth L23P]PF00276e8hl2L23P1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
V [auth L24E]PF01246e8hl2L24E1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
W [auth L24P]PF16906e8hl2L24P1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
X [auth L29P]PF00831e8hl2L29P1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
Y [auth L30E]PF01248e8hl2L30E1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
Z [auth L30P]PF00327e8hl2L30P1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
AA [auth L31E]PF01198e8hl2L31E1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
BA [auth L32E]PF01655e8hl2L32E1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
CA [auth L34E]PF01199e8hl2L34E1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
DA [auth L37A]PF01780e8hl2L37A1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
C [auth AEFG]PF03144e8hl2AEFG3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF03144ECOD (1.6)
C [auth AEFG]PF03764e8hl2AEFG1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03764ECOD (1.6)
C [auth AEFG]PF00679e8hl2AEFG2 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF00679ECOD (1.6)
C [auth AEFG]PF14492e8hl2AEFG5 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF14492ECOD (1.6)
C [auth AEFG]PF00009e8hl2AEFG4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00009ECOD (1.6)
EA [auth L37E]PF01907e8hl2L37E1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
FA [auth L39E]PF00832e8hl2L39E1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
GA [auth L40E]PF01020e8hl2L40E1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
HA [auth L44E]PF00935e8hl2L44E1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
IA [auth L7A1]PF01248e8hl2L7A11 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
BB [auth SL7A]PF01248e8hl2SL7A1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
JA [auth L7A2]PF01248e8hl2L7A21 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
KA [auth L15P]PF00828e8hl2L15P1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
LA [auth L21E]PF01157e8hl2L21E1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
NA [auth L46A]PF18533e8hl2L46A1 A: a+b two layersX: Archaea-specific ribosomal protein L46a (From Topology)H: Archaea-specific ribosomal protein L46a (From Topology)T: Archaea-specific ribosomal protein L46aF: PF18533ECOD (1.6)
PA [auth AL1P]PF00687e8hl2AL1P2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
PA [auth AL1P]PF00687e8hl2AL1P1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: PF00687ECOD (1.6)
QA [auth AS3P]PF00189e8hl2AS3P1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
QA [auth AS3P]PF07650e8hl2AS3P2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
RA [auth AS7P]PF00177e8hl2AS7P1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
SA [auth S10P]PF00338e8hl2S10P1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
TA [auth S13P]PF00416e8hl2S13P1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
UA [auth S14P]PF00253e8hl2S14P1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
VA [auth S17E]PF00833e8hl2S17E1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
WA [auth S19E]PF01090e8hl2S19E1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
XA [auth S19P]PF00203e8hl2S19P1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
YA [auth AS9P]PF00380e8hl2AS9P1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
E [auth AL2P]PF00181e8hl2AL2P1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
E [auth AL2P]PF03947e8hl2AL2P2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
ZA [auth S28E]PF01200e8hl2S28E1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
AB [auth S27A]PF01599e8hl2S27A1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
CB [auth AS2P]PF00318e8hl2AS2P1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
DB [auth AS4E]PF00900e8hl2AS4E3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
DB [auth AS4E]F_UNCLASSIFIEDe8hl2AS4E1 A: beta barrelsX: SH3H: SH3T: SH3F: F_UNCLASSIFIEDECOD (1.6)
DB [auth AS4E]PF01479e8hl2AS4E2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF01479ECOD (1.6)
EB [auth AS4P]PF00163,PF01479e8hl2AS4P1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
FB [auth AS5P]PF00333,PF03719e8hl2AS5P2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00333,PF03719ECOD (1.6)
FB [auth AS5P]F_UNCLASSIFIEDe8hl2AS5P1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: F_UNCLASSIFIEDECOD (1.6)
GB [auth AS6E]PF01092e8hl2AS6E1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
HB [auth AS8E]PF01201e8hl2AS8E1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
IB [auth AS8P]PF00410e8hl2AS8P2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
IB [auth AS8P]PF00410e8hl2AS8P1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
JB [auth S11P]PF00411e8hl2S11P1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
F [auth AL3P]PF00297e8hl2AL3P1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
KB [auth S12P]PF00164e8hl2S12P1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
LB [auth S15P]PF08069e8hl2S15P2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
LB [auth S15P]PF00312e8hl2S15P1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
MB [auth S17P]PF00366e8hl2S17P1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
NB [auth S24E]PF01282e8hl2S24E1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
OB [auth S27E]PF01667e8hl2S27E1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
PB [auth S3AE]PF01015e8hl2S3AE2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
PB [auth S3AE]PF01015e8hl2S3AE1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
G [auth AL4P]PF00573e8hl2AL4P1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
H [auth AL5P]PF00281,PF00673e8hl2AL5P1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
I [auth AL6P]PF00347e8hl2AL6P2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A23S]23s rRNA (3000-MER)---
J [auth ALX0]50S ribosomal protein L18Ae
K [auth L10E]50S ribosomal protein L10e
L [auth L13P]50S ribosomal protein L13
M [auth L141],
N [auth L142]
50S ribosomal protein L14e
O [auth L14P]50S ribosomal protein L14
P [auth L15E]50S ribosomal protein L15e
Q [auth L18E]50S ribosomal protein L18e
R [auth L18P]50S ribosomal protein L18
S [auth L19E]50S ribosomal protein L19e
T [auth L22P]50S ribosomal protein L22
B [auth A16S]16s rRNA (1493-MER)---
U [auth L23P]50S ribosomal protein L23
V [auth L24E]50S ribosomal protein L24e
W [auth L24P]50S ribosomal protein L24
X [auth L29P]50S ribosomal protein L29
Y [auth L30E]50S ribosomal protein L30e
Z [auth L30P]50S ribosomal protein L30
AA [auth L31E]50S ribosomal protein L31e
BA [auth L32E]50S ribosomal protein L32e
CA [auth L34E]50S ribosomal protein L34e
DA [auth L37A]50S ribosomal protein L37Ae
C [auth AEFG]Elongation factor 2 -
EA [auth L37E]50S ribosomal protein L37e
FA [auth L39E]50S ribosomal protein L39e
GA [auth L40E]50S ribosomal protein L40E
HA [auth L44E]50S ribosomal protein L44e
BB [auth SL7A],
IA [auth L7A1],
JA [auth L7A2]
50S ribosomal protein L7Ae
KA [auth L15P]50S ribosomal protein L15
LA [auth L21E]50S ribosomal protein L21e
MA [auth L45A]DUF2280 domain-containing protein- - -
NA [auth L46A]Conserved protein- - -
OA [auth L47A]50S ribosomal protein L47A- - -
D [auth A5S]5s rRNA (122-MER)---
PA [auth AL1P]50S ribosomal protein L1
QA [auth AS3P]30S ribosomal protein S3
RA [auth AS7P]30S ribosomal protein S7
SA [auth S10P]30S ribosomal protein S10
TA [auth S13P]30S ribosomal protein S13
UA [auth S14P]30S ribosomal protein S14 type Z
VA [auth S17E]30S ribosomal protein S17e
WA [auth S19E]30S ribosomal protein S19e
XA [auth S19P]30S ribosomal protein S19
YA [auth AS9P]30S ribosomal protein S9
E [auth AL2P]50S ribosomal protein L2
ZA [auth S28E]30S ribosomal protein S28e
AB [auth S27A]30S ribosomal protein S27ae
CB [auth AS2P]30S ribosomal protein S2
DB [auth AS4E]30S ribosomal protein S4e
EB [auth AS4P]30S ribosomal protein S4
FB [auth AS5P]30S ribosomal protein S5
GB [auth AS6E]30S ribosomal protein S6e
HB [auth AS8E]30S ribosomal protein S8e
IB [auth AS8P]30S ribosomal protein S8
JB [auth S11P]30S ribosomal protein S11
F [auth AL3P]50S ribosomal protein L3
KB [auth S12P]30S ribosomal protein S12
LB [auth S15P]30S ribosomal protein S15
MB [auth S17P]30S ribosomal protein S17
NB [auth S24E]30S ribosomal protein S24e
OB [auth S27E]30S ribosomal protein S27e
PB [auth S3AE]30S ribosomal protein S3Ae
QB [auth APTN],
RB [auth AETN]
tRNA (76-MER)---
SB [auth AMRN]mRNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')---
TB [auth APTP]PHE-PHE-PHE-PHE-PHE-PHE---
G [auth AL4P]50S ribosomal protein L4
H [auth AL5P]50S ribosomal protein L5
I [auth AL6P]50S ribosomal protein L6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth ALX0]IPR028877Large ribosomal subunit protein eL20Family
J [auth ALX0]IPR023573Large ribosomal subunit protein eL20 domainDomain
K [auth L10E]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
K [auth L10E]IPR022981Large ribosomal subunit protein uL16, archaeaFamily
K [auth L10E]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
K [auth L10E]IPR016180Large ribosomal subunit protein uL16 domainDomain
K [auth L10E]IPR047873Large ribosomal subunit protein uL16Family
K [auth L10E]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
L [auth L13P]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
L [auth L13P]IPR005822Large ribosomal subunit protein uL13Family
L [auth L13P]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
L [auth L13P]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
M [auth L141],
N [auth L142]
IPR023651Large ribosomal subunit protein eL14, archaealFamily
M [auth L141],
N [auth L142]
IPR039660Large ribosomal subunit protein eL14Family
M [auth L141],
N [auth L142]
IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
M [auth L141],
N [auth L142]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
M [auth L141],
N [auth L142]
IPR005824KOWDomain
M [auth L141],
N [auth L142]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth L14P]IPR019971Large ribosomal subunit protein uL14, archaealFamily
O [auth L14P]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
O [auth L14P]IPR000218Large ribosomal subunit protein uL14Family
O [auth L14P]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
P [auth L15E]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth L15E]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth L15E]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth L15E]IPR020926Large ribosomal subunit protein eL15, archaealFamily
P [auth L15E]IPR000439Large ribosomal subunit protein eL15Family
Q [auth L18E]IPR022947Large ribosomal subunit protein eL18, archaeaFamily
Q [auth L18E]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Q [auth L18E]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
Q [auth L18E]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
Q [auth L18E]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
R [auth L18P]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
S [auth L19E]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
S [auth L19E]IPR039547Large ribosomal subunit protein eL19Family
S [auth L19E]IPR033936Large ribosomal subunit protein eL19, archaealDomain
S [auth L19E]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
S [auth L19E]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
S [auth L19E]IPR000196Large ribosomal subunit protein eL19 domainDomain
T [auth L22P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
T [auth L22P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
T [auth L22P]IPR001063Large ribosomal subunit protein uL22Family
T [auth L22P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
U [auth L23P]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
U [auth L23P]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
U [auth L23P]IPR019985Large ribosomal subunit protein uL23Family
U [auth L23P]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
U [auth L23P]IPR013025Large ribosomal subunit protein uL23-likeFamily
V [auth L24E]IPR023438Large ribosomal subunit protein eL24Family
V [auth L24E]IPR011017TRASH domainDomain
V [auth L24E]IPR000988Large ribosomal subunit protein eL24-relatedFamily
V [auth L24E]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
V [auth L24E]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
W [auth L24P]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
W [auth L24P]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth L24P]IPR005824KOWDomain
W [auth L24P]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth L24P]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
X [auth L29P]IPR001854Large ribosomal subunit protein uL29Family
X [auth L29P]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
X [auth L29P]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Y [auth L30E]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
Y [auth L30E]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
Y [auth L30E]IPR000231Large ribosomal subunit protein eL30Family
Y [auth L30E]IPR039109Large ribosomal subunit protein eL30-likeFamily
Y [auth L30E]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
Z [auth L30P]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
Z [auth L30P]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Z [auth L30P]IPR039699Large ribosomal subunit protein uL30Family
Z [auth L30P]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Z [auth L30P]IPR005997Large ribosomal subunit protein uL30, archaealFamily
AA [auth L31E]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
AA [auth L31E]IPR000054Large ribosomal subunit protein eL31Family
BA [auth L32E]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
BA [auth L32E]IPR023654Large ribosomal subunit protein eL32, archaealFamily
BA [auth L32E]IPR001515Large ribosomal subunit protein eL32Family
BA [auth L32E]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
CA [auth L34E]IPR008195Large ribosomal subunit protein eL34Family
CA [auth L34E]IPR047868Large ribosomal subunit protein eL34, archaeal-typeFamily
CA [auth L34E]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
DA [auth L37A]IPR002674Large ribosomal subunit protein eL43Family
DA [auth L37A]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth L37A]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
C [auth AEFG]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
C [auth AEFG]IPR004543Translation elongation factor EFG/EF2, archaealFamily
C [auth AEFG]IPR000795Translational (tr)-type GTP-binding domainDomain
C [auth AEFG]IPR000640Elongation factor EFG, domain V-likeDomain
C [auth AEFG]IPR031157Tr-type G domain, conserved siteConserved Site
C [auth AEFG]IPR035647EF-G domain III/V-likeHomologous Superfamily
C [auth AEFG]IPR041095Elongation Factor G, domain IIDomain
C [auth AEFG]IPR004161Translation elongation factor EFTu-like, domain 2Domain
C [auth AEFG]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
C [auth AEFG]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
C [auth AEFG]IPR005225Small GTP-binding protein domainDomain
C [auth AEFG]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth AEFG]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
EA [auth L37E]IPR001569Large ribosomal subunit protein eL37Family
EA [auth L37E]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
EA [auth L37E]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth L37E]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
FA [auth L39E]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
FA [auth L39E]IPR000077Large ribosomal subunit protein eL39Family
FA [auth L39E]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
GA [auth L40E]IPR001975Large ribosomal subunit protein eL40 domainDomain
GA [auth L40E]IPR023657Large ribosomal subunit protein eL40, archaealFamily
GA [auth L40E]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
GA [auth L40E]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth L44E]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth L44E]IPR000552Large ribosomal subunit protein eL42Family
BB [auth SL7A],
IA [auth L7A1],
JA [auth L7A2]
IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
BB [auth SL7A],
IA [auth L7A1],
JA [auth L7A2]
IPR022481Large ribosomal subunit protein eL8, archaeaFamily
BB [auth SL7A],
IA [auth L7A1],
JA [auth L7A2]
IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
BB [auth SL7A],
IA [auth L7A1],
JA [auth L7A2]
IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
BB [auth SL7A],
IA [auth L7A1],
JA [auth L7A2]
IPR018492Ribosomal protein eL8/Nhp2 familyFamily
KA [auth L15P]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
KA [auth L15P]IPR021131Large ribosomal subunit protein uL15/eL18Domain
KA [auth L15P]IPR030878Large ribosomal subunit protein uL15Family
KA [auth L15P]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
KA [auth L15P]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
LA [auth L21E]IPR022856Large ribosomal subunit protein eL21, archaealFamily
LA [auth L21E]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
LA [auth L21E]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
LA [auth L21E]IPR001147Large ribosomal subunit protein eL21Family
LA [auth L21E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth L46A]IPR041043Domain of unknown function DUF5622Domain
PA [auth AL1P]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
PA [auth AL1P]IPR023669Large ribosomal subunit protein uL1, archaeaFamily
PA [auth AL1P]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
PA [auth AL1P]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
PA [auth AL1P]IPR002143Large ribosomal subunit protein uL1Family
PA [auth AL1P]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
QA [auth AS3P]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
QA [auth AS3P]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
QA [auth AS3P]IPR004087K Homology domainDomain
QA [auth AS3P]IPR004044K Homology domain, type 2Domain
QA [auth AS3P]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
QA [auth AS3P]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
QA [auth AS3P]IPR027488Small ribosomal subunit protein uS3, archaealFamily
QA [auth AS3P]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
QA [auth AS3P]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
RA [auth AS7P]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
RA [auth AS7P]IPR000235Small ribosomal subunit protein uS7Family
RA [auth AS7P]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
RA [auth AS7P]IPR026018Small ribosomal subunit protein uS7, archaealFamily
RA [auth AS7P]IPR023798Small ribosomal subunit protein uS7 domainDomain
RA [auth AS7P]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
SA [auth S10P]IPR001848Small ribosomal subunit protein uS10Family
SA [auth S10P]IPR027486Small ribosomal subunit protein uS10 domainDomain
SA [auth S10P]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
SA [auth S10P]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
SA [auth S10P]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
TA [auth S13P]IPR019977Small ribosomal subunit protein uS13, archaealFamily
TA [auth S13P]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
TA [auth S13P]IPR001892Small ribosomal subunit protein uS13Family
TA [auth S13P]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
TA [auth S13P]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
UA [auth S14P]IPR001209Small ribosomal subunit protein uS14Family
UA [auth S14P]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
UA [auth S14P]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
UA [auth S14P]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
UA [auth S14P]IPR023676Small ribosomal subunit protein uS14, archaeaFamily
VA [auth S17E]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
VA [auth S17E]IPR001210Small ribosomal subunit protein eS17Family
VA [auth S17E]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
WA [auth S19E]IPR027548Small ribosomal subunit protein eS19, archaealFamily
WA [auth S19E]IPR001266Small ribosomal subunit protein eS19Family
WA [auth S19E]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
WA [auth S19E]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
XA [auth S19P]IPR002222Small ribosomal subunit protein uS19Family
XA [auth S19P]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
XA [auth S19P]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
XA [auth S19P]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
YA [auth AS9P]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
YA [auth AS9P]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
YA [auth AS9P]IPR019958Small ribosomal subunit protein uS9, archaealFamily
YA [auth AS9P]IPR000754Small ribosomal subunit protein uS9Family
YA [auth AS9P]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
E [auth AL2P]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
E [auth AL2P]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E [auth AL2P]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth AL2P]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth AL2P]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
E [auth AL2P]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth AL2P]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
E [auth AL2P]IPR002171Large ribosomal subunit protein uL2Family
ZA [auth S28E]IPR028626Ribosomal protein eS28 conserved siteConserved Site
ZA [auth S28E]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
ZA [auth S28E]IPR000289Small ribosomal subunit protein eS28Family
AB [auth S27A]IPR002906Small ribosomal subunit protein eS31Domain
AB [auth S27A]IPR022845Small ribosomal subunit protein eS31, archaeaFamily
AB [auth S27A]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CB [auth AS2P]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
CB [auth AS2P]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
CB [auth AS2P]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
CB [auth AS2P]IPR001865Small ribosomal subunit protein uS2Family
CB [auth AS2P]IPR023454Small ribosomal subunit protein uS2, archaealFamily
DB [auth AS4E]IPR002942RNA-binding S4 domainDomain
DB [auth AS4E]IPR013845Small ribosomal subunit protein eS4, central regionDomain
DB [auth AS4E]IPR000876Small ribosomal subunit protein eS4Family
DB [auth AS4E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DB [auth AS4E]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
DB [auth AS4E]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
DB [auth AS4E]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
DB [auth AS4E]IPR005824KOWDomain
EB [auth AS4P]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
EB [auth AS4P]IPR002942RNA-binding S4 domainDomain
EB [auth AS4P]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
EB [auth AS4P]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
EB [auth AS4P]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
EB [auth AS4P]IPR022801Small ribosomal subunit protein uS4Family
EB [auth AS4P]IPR022802Small ribosomal subunit protein uS4, archaealFamily
FB [auth AS5P]IPR000851Small ribosomal subunit protein uS5Family
FB [auth AS5P]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
FB [auth AS5P]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
FB [auth AS5P]IPR047866Small ribosomal subunit protein uS5, archaeaFamily
FB [auth AS5P]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
FB [auth AS5P]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FB [auth AS5P]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
FB [auth AS5P]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GB [auth AS6E]IPR001377Small ribosomal subunit protein eS6Family
GB [auth AS6E]IPR020924Small ribosomal subunit protein eS6, archaealFamily
HB [auth AS8E]IPR001047Small ribosomal subunit protein eS8Family
HB [auth AS8E]IPR020919Small ribosomal subunit protein eS8, archaealFamily
HB [auth AS8E]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
HB [auth AS8E]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
IB [auth AS8P]IPR000630Small ribosomal subunit protein uS8Family
IB [auth AS8P]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
IB [auth AS8P]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
JB [auth S11P]IPR019961Small ribosomal subunit protein uS11, archaealFamily
JB [auth S11P]IPR001971Small ribosomal subunit protein uS11Family
JB [auth S11P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
JB [auth S11P]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
F [auth AL3P]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth AL3P]IPR019928Large ribosomal subunit protein uL3, archaealFamily
F [auth AL3P]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth AL3P]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
F [auth AL3P]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
F [auth AL3P]IPR000597Large ribosomal subunit protein uL3Family
KB [auth S12P]IPR006032Small ribosomal subunit protein uS12Family
KB [auth S12P]IPR022863Ribosomal protein uS12, archaeaFamily
KB [auth S12P]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
KB [auth S12P]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
LB [auth S15P]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
LB [auth S15P]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
LB [auth S15P]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
LB [auth S15P]IPR000589Small ribosomal subunit protein uS15Family
MB [auth S17P]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MB [auth S17P]IPR000266Small ribosomal subunit protein uS17Family
MB [auth S17P]IPR019978Small ribosomal subunit protein uS17, archaealFamily
MB [auth S17P]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
NB [auth S24E]IPR001976Small ribosomal subunit protein eS24Family
NB [auth S24E]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
NB [auth S24E]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
OB [auth S27E]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
OB [auth S27E]IPR000592Small ribosomal subunit protein eS27Family
OB [auth S27E]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
PB [auth S3AE]IPR001593Small ribosomal subunit protein eS1Family
PB [auth S3AE]IPR030838Small ribosomal subunit protein eS1, archaealFamily
G [auth AL4P]IPR019970Large ribosomal subunit protein uL4, archaeaFamily
G [auth AL4P]IPR002136Large ribosomal subunit protein uL4Family
G [auth AL4P]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
G [auth AL4P]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
H [auth AL5P]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
H [auth AL5P]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
H [auth AL5P]IPR022804Large ribosomal subunit protein uL5, archaealFamily
H [auth AL5P]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
H [auth AL5P]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
H [auth AL5P]IPR002132Large ribosomal subunit protein uL5Family
I [auth AL6P]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
I [auth AL6P]IPR019907Large ribosomal subunit protein uL6, archaeaFamily
I [auth AL6P]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
I [auth AL6P]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
I [auth AL6P]IPR000702Large ribosomal subunit protein uL6-likeFamily