8HKV

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth L13P]PF00572e8hkvL13P1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
K [auth L141]PF00467e8hkvL1411 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467ECOD (1.6)
L [auth L142]PF00467e8hkvL1421 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467ECOD (1.6)
M [auth L14P]PF00238e8hkvL14P1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
N [auth L15E]PF00827e8hkvL15E1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
O [auth L18E]PF00828e8hkvL18E1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
P [auth L18P]PF17144e8hkvL18P1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF17144ECOD (1.6)
Q [auth L19E]PF01280e8hkvL19E1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
Q [auth L19E]PF01280e8hkvL19E2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
R [auth L22P]PF00237e8hkvL22P1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
S [auth L23P]PF00276e8hkvL23P1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
T [auth L24E]PF01246e8hkvL24E1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
U [auth L24P]PF16906e8hkvL24P1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
V [auth L29P]PF00831e8hkvL29P1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
W [auth L30E]PF01248e8hkvL30E1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
X [auth L30P]PF00327e8hkvL30P1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
Y [auth L31E]PF01198e8hkvL31E1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
Z [auth L32E]PF01655e8hkvL32E1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
AA [auth L34E]PF01199e8hkvL34E1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
BA [auth L37A]PF01780e8hkvL37A1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
CA [auth L37E]PF01907e8hkvL37E1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
DA [auth L39E]PF00832e8hkvL39E1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
C [auth AL2P]PF00181e8hkvAL2P2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
C [auth AL2P]PF03947e8hkvAL2P1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
EA [auth L40E]PF01020e8hkvL40E1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
FA [auth L44E]PF00935e8hkvL44E1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
GA [auth L7A1]PF01248e8hkvL7A11 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
HA [auth L7A2]PF01248e8hkvL7A21 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
IA [auth L15P]PF00828e8hkvL15P1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
JA [auth L21E]PF01157e8hkvL21E1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
LA [auth L46A]PF18533e8hkvL46A1 A: a+b two layersX: Archaea-specific ribosomal protein L46a (From Topology)H: Archaea-specific ribosomal protein L46a (From Topology)T: Archaea-specific ribosomal protein L46aF: PF18533ECOD (1.6)
D [auth AL3P]PF00297e8hkvAL3P1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
E [auth AL4P]PF00573e8hkvAL4P1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
F [auth AL5P]PF00281,PF00673e8hkvAL5P1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
G [auth AL6P]PF00347e8hkvAL6P2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
H [auth ALX0]PF01775e8hkvALX01 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
I [auth L10E]PF00252e8hkvL10E1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth L13P]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
K [auth L141],
L [auth L142]
PF00467KOW motif (KOW)KOW motif- Family
M [auth L14P]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
N [auth L15E]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
O [auth L18E]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
P [auth L18P]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
Q [auth L19E]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
R [auth L22P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
S [auth L23P]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
T [auth L24E]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
U [auth L24P]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
U [auth L24P]PF00467KOW motif (KOW)KOW motif- Family
V [auth L29P]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
W [auth L30E]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
X [auth L30P]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
Y [auth L31E]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
Z [auth L32E]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
AA [auth L34E]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
BA [auth L37A]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
CA [auth L37E]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
DA [auth L39E]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
C [auth AL2P]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
C [auth AL2P]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
EA [auth L40E]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
FA [auth L44E]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
GA [auth L7A1],
HA [auth L7A2]
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
IA [auth L15P]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
JA [auth L21E]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
LA [auth L46A]PF18533Domain of unknown function (DUF5622) (DUF5622)Domain of unknown function (DUF5622)This is a domain of unknown function found in archaea-specific ribosomal proteins such as L46a which is suggested to directly bind to rRNA in the ribosome [1].Domain
D [auth AL3P]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
E [auth AL4P]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth AL5P]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
F [auth AL5P]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
G [auth AL6P]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
H [auth ALX0]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
I [auth L10E]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A23S]23s rRNA (2996-MER)---
J [auth L13P]50S ribosomal protein L13
K [auth L141],
L [auth L142]
50S ribosomal protein L14e
M [auth L14P]50S ribosomal protein L14
N [auth L15E]50S ribosomal protein L15e
O [auth L18E]50S ribosomal protein L18e
P [auth L18P]50S ribosomal protein L18
Q [auth L19E]50S ribosomal protein L19e
R [auth L22P]50S ribosomal protein L22
S [auth L23P]50S ribosomal protein L23
T [auth L24E]50S ribosomal protein L24e
B [auth A5S]5s rRNA (122-MER)---
U [auth L24P]50S ribosomal protein L24
V [auth L29P]50S ribosomal protein L29
W [auth L30E]50S ribosomal protein L30e
X [auth L30P]50S ribosomal protein L30
Y [auth L31E]50S ribosomal protein L31e
Z [auth L32E]50S ribosomal protein L32e
AA [auth L34E]50S ribosomal protein L34e
BA [auth L37A]50S ribosomal protein L37Ae
CA [auth L37E]50S ribosomal protein L37e
DA [auth L39E]50S ribosomal protein L39e
C [auth AL2P]50S ribosomal protein L2
EA [auth L40E]50S ribosomal protein L40E
FA [auth L44E]50S ribosomal protein L44e
GA [auth L7A1],
HA [auth L7A2]
50S ribosomal protein L7Ae
IA [auth L15P]50S ribosomal protein L15
JA [auth L21E]50S ribosomal protein L21e
KA [auth L45A]DUF2280 domain-containing protein- - -
LA [auth L46A]Conserved protein- - -
MA [auth L47A]50S ribosomal protein L47A- - -
D [auth AL3P]50S ribosomal protein L3
E [auth AL4P]50S ribosomal protein L4
F [auth AL5P]50S ribosomal protein L5
G [auth AL6P]50S ribosomal protein L6
H [auth ALX0]50S ribosomal protein L18Ae
I [auth L10E]50S ribosomal protein L10e

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth L13P]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
J [auth L13P]IPR005822Large ribosomal subunit protein uL13Family
J [auth L13P]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
J [auth L13P]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
K [auth L141],
L [auth L142]
IPR023651Large ribosomal subunit protein eL14, archaealFamily
K [auth L141],
L [auth L142]
IPR039660Large ribosomal subunit protein eL14Family
K [auth L141],
L [auth L142]
IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
K [auth L141],
L [auth L142]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
K [auth L141],
L [auth L142]
IPR005824KOWDomain
K [auth L141],
L [auth L142]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
M [auth L14P]IPR019971Large ribosomal subunit protein uL14, archaealFamily
M [auth L14P]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
M [auth L14P]IPR000218Large ribosomal subunit protein uL14Family
M [auth L14P]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
N [auth L15E]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
N [auth L15E]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
N [auth L15E]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
N [auth L15E]IPR020926Large ribosomal subunit protein eL15, archaealFamily
N [auth L15E]IPR000439Large ribosomal subunit protein eL15Family
O [auth L18E]IPR022947Large ribosomal subunit protein eL18, archaeaFamily
O [auth L18E]IPR021131Large ribosomal subunit protein uL15/eL18Domain
O [auth L18E]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
O [auth L18E]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
O [auth L18E]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
P [auth L18P]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
Q [auth L19E]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Q [auth L19E]IPR039547Large ribosomal subunit protein eL19Family
Q [auth L19E]IPR033936Large ribosomal subunit protein eL19, archaealDomain
Q [auth L19E]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
Q [auth L19E]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Q [auth L19E]IPR000196Large ribosomal subunit protein eL19 domainDomain
R [auth L22P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth L22P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth L22P]IPR001063Large ribosomal subunit protein uL22Family
R [auth L22P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
S [auth L23P]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth L23P]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
S [auth L23P]IPR019985Large ribosomal subunit protein uL23Family
S [auth L23P]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
S [auth L23P]IPR013025Large ribosomal subunit protein uL23-likeFamily
T [auth L24E]IPR023438Large ribosomal subunit protein eL24Family
T [auth L24E]IPR011017TRASH domainDomain
T [auth L24E]IPR000988Large ribosomal subunit protein eL24-relatedFamily
T [auth L24E]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
T [auth L24E]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
U [auth L24P]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
U [auth L24P]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth L24P]IPR005824KOWDomain
U [auth L24P]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth L24P]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
V [auth L29P]IPR001854Large ribosomal subunit protein uL29Family
V [auth L29P]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
V [auth L29P]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
W [auth L30E]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
W [auth L30E]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
W [auth L30E]IPR000231Large ribosomal subunit protein eL30Family
W [auth L30E]IPR039109Large ribosomal subunit protein eL30-likeFamily
W [auth L30E]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
X [auth L30P]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
X [auth L30P]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
X [auth L30P]IPR039699Large ribosomal subunit protein uL30Family
X [auth L30P]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
X [auth L30P]IPR005997Large ribosomal subunit protein uL30, archaealFamily
Y [auth L31E]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
Y [auth L31E]IPR000054Large ribosomal subunit protein eL31Family
Z [auth L32E]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
Z [auth L32E]IPR023654Large ribosomal subunit protein eL32, archaealFamily
Z [auth L32E]IPR001515Large ribosomal subunit protein eL32Family
Z [auth L32E]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
AA [auth L34E]IPR008195Large ribosomal subunit protein eL34Family
AA [auth L34E]IPR047868Large ribosomal subunit protein eL34, archaeal-typeFamily
AA [auth L34E]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
BA [auth L37A]IPR002674Large ribosomal subunit protein eL43Family
BA [auth L37A]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth L37A]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
CA [auth L37E]IPR001569Large ribosomal subunit protein eL37Family
CA [auth L37E]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
CA [auth L37E]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CA [auth L37E]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
DA [auth L39E]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
DA [auth L39E]IPR000077Large ribosomal subunit protein eL39Family
DA [auth L39E]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
C [auth AL2P]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
C [auth AL2P]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth AL2P]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth AL2P]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth AL2P]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth AL2P]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth AL2P]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth AL2P]IPR002171Large ribosomal subunit protein uL2Family
EA [auth L40E]IPR001975Large ribosomal subunit protein eL40 domainDomain
EA [auth L40E]IPR023657Large ribosomal subunit protein eL40, archaealFamily
EA [auth L40E]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
EA [auth L40E]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth L44E]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth L44E]IPR000552Large ribosomal subunit protein eL42Family
GA [auth L7A1],
HA [auth L7A2]
IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
GA [auth L7A1],
HA [auth L7A2]
IPR022481Large ribosomal subunit protein eL8, archaeaFamily
GA [auth L7A1],
HA [auth L7A2]
IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
GA [auth L7A1],
HA [auth L7A2]
IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
GA [auth L7A1],
HA [auth L7A2]
IPR018492Ribosomal protein eL8/Nhp2 familyFamily
IA [auth L15P]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
IA [auth L15P]IPR021131Large ribosomal subunit protein uL15/eL18Domain
IA [auth L15P]IPR030878Large ribosomal subunit protein uL15Family
IA [auth L15P]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IA [auth L15P]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
JA [auth L21E]IPR022856Large ribosomal subunit protein eL21, archaealFamily
JA [auth L21E]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
JA [auth L21E]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
JA [auth L21E]IPR001147Large ribosomal subunit protein eL21Family
JA [auth L21E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LA [auth L46A]IPR041043Domain of unknown function DUF5622Domain
D [auth AL3P]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth AL3P]IPR019928Large ribosomal subunit protein uL3, archaealFamily
D [auth AL3P]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth AL3P]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
D [auth AL3P]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
D [auth AL3P]IPR000597Large ribosomal subunit protein uL3Family
E [auth AL4P]IPR019970Large ribosomal subunit protein uL4, archaeaFamily
E [auth AL4P]IPR002136Large ribosomal subunit protein uL4Family
E [auth AL4P]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
E [auth AL4P]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth AL5P]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth AL5P]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth AL5P]IPR022804Large ribosomal subunit protein uL5, archaealFamily
F [auth AL5P]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth AL5P]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth AL5P]IPR002132Large ribosomal subunit protein uL5Family
G [auth AL6P]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
G [auth AL6P]IPR019907Large ribosomal subunit protein uL6, archaeaFamily
G [auth AL6P]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
G [auth AL6P]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
G [auth AL6P]IPR000702Large ribosomal subunit protein uL6-likeFamily
H [auth ALX0]IPR028877Large ribosomal subunit protein eL20Family
H [auth ALX0]IPR023573Large ribosomal subunit protein eL20 domainDomain
I [auth L10E]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
I [auth L10E]IPR022981Large ribosomal subunit protein uL16, archaeaFamily
I [auth L10E]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
I [auth L10E]IPR016180Large ribosomal subunit protein uL16 domainDomain
I [auth L10E]IPR047873Large ribosomal subunit protein uL16Family
I [auth L10E]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site