8GLX | pdb_00008glx

CryoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 6:2:1 stoichiometry from E. coli Tn7

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth X], H [auth Y]	PF15978	Tn7-like transposition protein D (TnsD)	Tn7-like transposition protein D	-	Family
B [auth X], H [auth Y]	PF06527	TniQ (TniQ)	TniQ	-	Family
A [auth G], E, F, G [auth C], I [auth A], A [auth G], E, F, G [auth C], I [auth A], J [auth B]	PF13401	AAA domain (AAA_22)	AAA domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth X], H [auth Y]	Transposon Tn7 transposition protein TnsD	DNA binding binding nucleic acid binding	nucleobase-containing compound metabolic process DNA recombination metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process transposition	-
D [auth I]	DNA (50-MER)	-	-	-
C [auth H]	DNA (50-MER)	-	-	-
A [auth G], E, F, G [auth C], I [auth A], A [auth G], E, F, G [auth C], I [auth A], J [auth B]	Transposon Tn7 transposition protein TnsC	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity	nucleobase-containing compound metabolic process DNA recombination metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process transposition	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth X], H [auth Y]	IPR032750	Transposon Tn7 transposition protein TnsD, C-terminal	Domain
B [auth X], H [auth Y]	IPR009492	TniQ	Domain
A [auth G], E, F, G [auth C], I [auth A], A [auth G], E, F, G [auth C], I [auth A], J [auth B]	IPR003593	AAA+ ATPase domain	Domain
A [auth G], E, F, G [auth C], I [auth A], A [auth G], E, F, G [auth C], I [auth A], J [auth B]	IPR021542	Tn7 transposition regulator TnsC	Family
A [auth G], E, F, G [auth C], I [auth A], A [auth G], E, F, G [auth C], I [auth A], J [auth B]	IPR049945	ORC1/DEAH AAA+ ATPase domain	Domain
A [auth G], E, F, G [auth C], I [auth A], A [auth G], E, F, G [auth C], I [auth A], J [auth B]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.