8GJU
Crystal structure of human methylmalonyl-CoA mutase (MMUT) in complex with methylmalonic acidemia type A protein (MMAA), coenzyme A, and GDP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | Simibi-like P-loop NTPases | 8056302 | 3002018 | SCOP2B (2022-06-29) |
B [auth F] | SCOP2B Superfamily | Simibi-like P-loop NTPases | 8056302 | 3002018 | SCOP2B (2022-06-29) |
F [auth A] | SCOP2B Superfamily | Simibi-like P-loop NTPases | 8056302 | 3002018 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | Simibi-like P-loop NTPases | 8056302 | 3002018 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | PF03308 | e8gjuD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03308 | ECOD (1.6) |
B [auth F] | PF03308 | e8gjuF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03308 | ECOD (1.6) |
F [auth A] | PF03308 | e8gjuA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03308 | ECOD (1.6) |
G [auth B] | PF03308 | e8gjuB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF03308 | ECOD (1.6) |
C [auth J] | PF01642 | e8gjuJ2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01642 | ECOD (1.6) |
C [auth J] | PF02310 | e8gjuJ1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF02310 | ECOD (1.6) |
D [auth K] | PF01642 | e8gjuK2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01642 | ECOD (1.6) |
D [auth K] | PF02310 | e8gjuK1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF02310 | ECOD (1.6) |
E [auth L] | PF01642 | e8gjuL1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01642 | ECOD (1.6) |
E [auth L] | PF02310 | e8gjuL2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF02310 | ECOD (1.6) |
H | PF01642 | e8gjuH2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01642 | ECOD (1.6) |
H | PF02310 | e8gjuH1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: PF02310 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D], B [auth F], F [auth A], G [auth B] | PF03308 | Methylmalonyl Co-A mutase-associated GTPase MeaB (MeaB) | Methylmalonyl Co-A mutase-associated GTPase MeaB | Family members were previously thought to be ArgK proteins acting as ATPase enzymes and kinases. They are now believed to be methylmalonyl Co-A mutase-associated GTPase MeaB. Structural studies of MeaB and the human ortholog (methylmalonyl associated ... | Domain |
C [auth J], D [auth K], E [auth L], H | PF02310 | B12 binding domain (B12-binding) | B12 binding domain | This domain binds to B12 (adenosylcobamide)[1-3], it is found in several enzymes, such as glutamate mutase Swiss:Q05488, methionine synthase Swiss:Q99707 and methylmalonyl-CoA mutase Swiss:P22033. It contains a conserved DxHxxGx(41)SxVx(26)GG motif, ... | Domain |
C [auth J], D [auth K], E [auth L], H | PF01642 | Methylmalonyl-CoA mutase (MM_CoA_mutase) | Methylmalonyl-CoA mutase | - | Family |