Local refinement of SARS-CoV-2 spike/nanobody mixture complex around RBD
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8092467 | 3001706 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8092467 | 3001706 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | SARS coronavirus receptor-binding domain-like | 8092467 | 3001706 | SCOP2B (2022-06-29) |
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
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D [auth N] | Heavy Chain | IGHV1 | - | spike glycoprotein | SAbDab (2024-05-10) |
E [auth O], F [auth M] | Heavy Chain | IGHV1 | - | spike glycoprotein | SAbDab (2024-05-10) |
Chains | Accession | Name | Type |
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A, B, C [auth D] | IPR044873 | Spike glycoprotein S2, coronavirus, heptad repeat 1 | Domain |
A, B, C [auth D] | IPR044366 | Spike (S) protein S1 subunit, receptor-binding domain, SARS-CoV-2 | Domain |
A, B, C [auth D] | IPR018548 | Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus | Domain |
A, B, C [auth D] | IPR044341 | Spike (S) protein S1 subunit, N-terminal domain, SARS-CoV-like | Domain |
A, B, C [auth D] | IPR032500 | Spike glycoprotein S1, N-terminal domain, betacoronavirus-like | Domain |
A, B, C [auth D] | IPR042578 | Spike glycoprotein, betacoronavirus | Family |
A, B, C [auth D] | IPR036326 | Spike S1 subunit, receptor binding domain superfamily, betacoronavirus | Homologous Superfamily |
A, B, C [auth D] | IPR043002 | Spike glycoprotein, N-terminal domain superfamily | Homologous Superfamily |
A, B, C [auth D] | IPR044874 | Spike glycoprotein S2, coronavirus, heptad repeat 2 | Domain |
A, B, C [auth D] | IPR043473 | Spike glycoprotein S2 superfamily, coronavirus | Homologous Superfamily |
A, B, C [auth D] | IPR043607 | Coronavirus spike glycoprotein S1, C-terminal | Domain |
A, B, C [auth D] | IPR002552 | Spike glycoprotein S2, coronavirus | Domain |