8G5G

Native GABA-A receptor from the mouse brain, meta-alpha1-alpha3-beta2-gamma2 subtype, in complex with GABA, Zolpidem, and endogenous neurosteroid


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF02931e8g5gB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
BPF02932e8g5gB1 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)
D [auth E]PF02931e8g5gE1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
D [auth E]PF02932e8g5gE2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)
E [auth H]PF07686e8g5gH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
F [auth L]PF07686e8g5gL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
G [auth C]PF02931e8g5gC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
G [auth C]PF02932e8g5gC2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)
APF02931e8g5gA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
APF02932e8g5gA2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)
C [auth D]PF02931e8g5gD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: PF02931ECOD (1.6)
C [auth D]PF02932e8g5gD2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: PF02932ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
E [auth H]Heavy ChainIGHV1 -gamma-aminobutyric acid receptor subunit alpha-1SAbDab (2024-05-03)
F [auth L]Light ChainIGKV6 Kappagamma-aminobutyric acid receptor subunit alpha-1SAbDab (2024-05-03)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B,
D [auth E]
Gamma-aminobutyric acid receptor subunit beta-2
E [auth H]Heavy Chain of 8E3 Fab---
F [auth L]Light Chain of 8E3 Fab---
G [auth C]Gamma-aminobutyric acid receptor subunit alpha-3
Gamma-aminobutyric acid receptor subunit alpha-1
C [auth D]Gamma-aminobutyric acid receptor subunit gamma-2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B,
D [auth E]
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
B,
D [auth E]
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
B,
D [auth E]
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
B,
D [auth E]
IPR002289Gamma-aminobutyric-acid A receptor, beta subunitFamily
B,
D [auth E]
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
B,
D [auth E]
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
B,
D [auth E]
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
B,
D [auth E]
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
B,
D [auth E]
IPR006201Neurotransmitter-gated ion-channelFamily
G [auth C]IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
G [auth C]IPR005433Gamma-aminobutyric-acid A receptor, alpha 3 subunitFamily
G [auth C]IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
G [auth C]IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
G [auth C]IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
G [auth C]IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
G [auth C]IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
G [auth C]IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
G [auth C]IPR038050Neuronal acetylcholine receptorHomologous Superfamily
G [auth C]IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
G [auth C]IPR006201Neurotransmitter-gated ion-channelFamily
IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
IPR005431Gamma-aminobutyric-acid A receptor, alpha 1 subunitFamily
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
IPR047079Gamma-aminobutyric acid receptor subunit alpha-1, extracellular domainDomain
IPR006201Neurotransmitter-gated ion-channelFamily
C [auth D]IPR005437Gamma-aminobutyric acid receptor subunit gamma-1/4Family
C [auth D]IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
C [auth D]IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
C [auth D]IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
C [auth D]IPR005439Gamma-aminobutyric-acid A receptor, gamma 2 subunitFamily
C [auth D]IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
C [auth D]IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
C [auth D]IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
C [auth D]IPR038050Neuronal acetylcholine receptorHomologous Superfamily
C [auth D]IPR006201Neurotransmitter-gated ion-channelFamily