Cryo-EM structure of TBAJ-876-bound Mycobacterium smegmatis ATP synthase rotational state 2 (backbone model)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth C] | e8g0dC1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| B [auth A] | e8g0dA1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| K [auth 3] | e8g0d31 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| L [auth 4] | e8g0d41 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| M [auth 5] | e8g0d51 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| N [auth 6] | e8g0d61 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| O [auth 7] | e8g0d71 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| P [auth 8] | e8g0d81 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| Q [auth 9] | e8g0d91 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| R [auth 1] | e8g0d11 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| S [auth 2] | e8g0d21 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| I [auth b] | e8g0db1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| H | e8g0dH1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| G | e8g0dG1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| D [auth F] | e8g0dF1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| E [auth D] | e8g0dD1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) | |
| F [auth E] | e8g0dE1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: MotA_ExbB | F: | ECOD (20:10:01) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth C], B [auth A], C [auth B] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
| A [auth C], B [auth A], C [auth B] | PF00119 | ATP synthase A chain (ATP-synt_A) | ATP synthase A chain | Domain | |
| A [auth C], B [auth A], C [auth B] | PF00306 | ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C) | ATP synthase alpha/beta chain, C terminal domain | Domain | |
| A [auth C], B [auth A], C [auth B] | PF00430 | ATP synthase B/B' CF(0) (ATP-synt_B) | ATP synthase B/B' CF(0) | - | Coiled-coil |
| A [auth C], B [auth A], C [auth B] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
| PF00137 | ATP synthase subunit C (ATP-synt_C) | ATP synthase subunit C | This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. | Domain | |
| PF02823 | ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N) | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ... | Domain | |
| PF00231 | ATP synthase (ATP-synt) | ATP synthase | Domain | ||
| D [auth F], E [auth D], F [auth E] | PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain |
| D [auth F], E [auth D], F [auth E] | PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain |
| D [auth F], E [auth D], F [auth E] | PF00430 | ATP synthase B/B' CF(0) (ATP-synt_B) | ATP synthase B/B' CF(0) | - | Coiled-coil |
| D [auth F], E [auth D], F [auth E] | PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain |
| D [auth F], E [auth D], F [auth E] | PF00213 | ATP synthase delta (OSCP) subunit (OSCP) | ATP synthase delta (OSCP) subunit | - | Family |














