Structure of HIV-1 BG505 SOSIP-HT2 in complex with two CD4 molecules (class I)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H [auth Z] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054739 | 3000071 | SCOP2B (2022-06-29) |
| H [auth Z] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054493 | 3000071 | SCOP2B (2022-06-29) |
| G [auth Y] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054739 | 3000071 | SCOP2B (2022-06-29) |
| G [auth Y] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054493 | 3000071 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Virus ectodomain | 8085614 | 3001628 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Virus ectodomain | 8085614 | 3001628 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Virus ectodomain | 8085614 | 3001628 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00516 | Envelope glycoprotein GP120 (GP120) | Envelope glycoprotein GP120 | The envelope glycoprotein Gp160 of HIV1 is cleaved into the surface protein Gp120 and the transmembrane protein Gp41. The entry of HIV requires interaction of viral GP120 with the CD4 glycoprotein (Swiss:P01730) and a chemokine receptor on the cell s ... | Domain | |
| G [auth Y], H [auth Z] | PF05790 | Immunoglobulin C2-set domain (C2-set) | Immunoglobulin C2-set domain | Domain | |
| G [auth Y], H [auth Z] | PF00047 | Immunoglobulin domain (ig) | Immunoglobulin domain | Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prote ... | Domain |
| PF00517 | Retroviral envelope protein (GP41) | Retroviral envelope protein | - | Family |














