8FYF

Human TMEM175-LAMP1 transmembrane domain only complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF06736e8fyfA2 A: alpha complex topologyX: Potassium channel TMEM175 (From Topology)H: Potassium channel TMEM175 (From Topology)T: Potassium channel TMEM175F: PF06736ECOD (1.6)
BPF06736e8fyfB2 A: alpha complex topologyX: Potassium channel TMEM175 (From Topology)H: Potassium channel TMEM175 (From Topology)T: Potassium channel TMEM175F: PF06736ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF06736Endosomal/lysosomal potassium channel TMEM175 (TMEM175)Endosomal/lysosomal potassium channel TMEM175- Family
C, D
PF21222Lysosome-associated membrane glycoprotein 2, transmembrane segment (Lamp2_2nd)Lysosome-associated membrane glycoprotein 2, transmembrane segmentThis domain is found in Lysosome-associated membrane glycoprotein 2 from humans (Lamp2) and similar proteins from vertebrates. Lamp2 is an integral membrane protein that plays an important role in chaperone-mediated autophagy (CMA), targeting pertine ...This domain is found in Lysosome-associated membrane glycoprotein 2 from humans (Lamp2) and similar proteins from vertebrates. Lamp2 is an integral membrane protein that plays an important role in chaperone-mediated autophagy (CMA), targeting pertinent proteins for lysosomal degradation. This protein is organised into two conserved luminal domains, a single transmembrane domain (this entry) and a short C-terminal cytosolic tail. It adopts a trimeric configuration, and the transmembrane domains of the three monomers form a three-helix bundle structure [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Endosomal/lysosomal potassium channel TMEM175
C, D
Lysosome-associated membrane glycoprotein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR010617Endosomal/lysosomal proton channel TMEM175-likeFamily
C, D
IPR048524Lysosome-associated membrane glycoprotein 2-like, transmembrane domainDomain
C, D
IPR002000Lysosome-associated membrane glycoproteinFamily
C, D
IPR048528Lysosome-associated membrane glycoprotein 2-like, luminal domainsDomain
C, D
IPR018134Lysosome-associated membrane glycoprotein, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B
Pharos:  Q9BSA9
C, D
Pharos:  P11279

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D
MemProtMDAnnotated as membrane protein by MemProtMD