8FXI | pdb_00008fxi

Cryo-EM structure of Stanieria sp. CphA2 in complex with ADPCP and 4x(beta-Asp-Arg)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FGlyco_hydro_43e8fxiF1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
EGlyco_hydro_43e8fxiE1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
DGlyco_hydro_43e8fxiD1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
CGlyco_hydro_43e8fxiC1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
BGlyco_hydro_43e8fxiB1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)
AGlyco_hydro_43e8fxiA1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02786Carbamoyl-phosphate synthase L chain, ATP binding domain (CPSase_L_D2)Carbamoyl-phosphate synthase L chain, ATP binding domainCarbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines [2]. The c ...Carbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines [2]. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolysis of glutamine to ammonia, which is used by the large chain to synthesise carbamoyl phosphate. See Pfam:PF00988. The small chain has a GATase domain in the carboxyl terminus. See Pfam:PF00117. The ATP binding domain (this one) has an ATP-grasp fold.
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR011761ATP-grasp foldDomain
A, B, C, D, E
IPR013815ATP-grasp fold, subdomain 1Homologous Superfamily
A, B, C, D, E
IPR005479Carbamoyl phosphate synthase, ATP-binding domainDomain