8FW5 | pdb_00008fw5

Chimeric HsGATOR1-SpGtr-SpLam complex


Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
D3.30.450.190 Alpha Beta 2-Layer Sandwich Beta-Lactamase CATH (utative)
E3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
E3.30.450.190 Alpha Beta 2-Layer Sandwich Beta-Lactamase CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF24064GATOR1 complex protein NPRL3, C-terminal HTH (HTH_NPRL3)GATOR1 complex protein NPRL3, C-terminal HTHThis domain is found at the C-terminal end of human GATOR1 complex protein NPRL3 (NPRL3) and similar proteins mainly found in animal and fungi. As a component of the GATOR1 complex, NPRL3 functions as an inhibitor of the amino acid-sensing branch of ...This domain is found at the C-terminal end of human GATOR1 complex protein NPRL3 (NPRL3) and similar proteins mainly found in animal and fungi. As a component of the GATOR1 complex, NPRL3 functions as an inhibitor of the amino acid-sensing branch of the mTORC1 pathway. This domain shows an helix-turn-helix (HTH) configuration [1,2].
Domain
PF03666Nitrogen Permease regulator of amino acid transport activity 3 (NPR3)Nitrogen Permease regulator of amino acid transport activity 3- Family
PF04670Gtr1/RagA G protein conserved region (Gtr1_RagA)Gtr1/RagA G protein conserved regionGTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is ...GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is the human Rag C, a novel protein that has been shown to interact with RagA/B [1,2,3,4].
Domain
PF04670Gtr1/RagA G protein conserved region (Gtr1_RagA)Gtr1/RagA G protein conserved regionGTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is ...GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is the human Rag C, a novel protein that has been shown to interact with RagA/B [1,2,3,4].
Domain
PF06218Nitrogen permease regulator 2 (NPR2)Nitrogen permease regulator 2- Family
PF12257Vacuolar membrane-associated protein Iml1, N-terminal domain (IML1)Vacuolar membrane-associated protein Iml1, N-terminal domainProteins in this family contain a DEP domain, which is a globular domain of about 80 residues. This entry includes vacuolar membrane-associated protein Iml1 and DEP domain-containing protein 5/DDB_G0279099. In Saccharomyces cerevisiae, Iml1 is a subu ...Proteins in this family contain a DEP domain, which is a globular domain of about 80 residues. This entry includes vacuolar membrane-associated protein Iml1 and DEP domain-containing protein 5/DDB_G0279099. In Saccharomyces cerevisiae, Iml1 is a subunit of both the SEA (Seh1-associated) and Iml1 complexes (Iml1-Npr2-Npr3). SEA complex is associates dynamically with the vacuole and is involved in autophagy [1, 2]. Iml1 complex is required for non-nitrogen-starvation (NNS)-induced autophagy [3].
Domain
PF00610Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) (DEP)Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)The DEP domain [1] is responsible for mediating intracellular protein targeting and regulation of protein stability in the cell [2-3]. The DEP domain is present in a number of signaling molecules, including Regulator of G protein Signaling (RGS) prot ...The DEP domain [1] is responsible for mediating intracellular protein targeting and regulation of protein stability in the cell [2-3]. The DEP domain is present in a number of signaling molecules, including Regulator of G protein Signaling (RGS) proteins, and has been implicated in membrane targeting [4-5]. New findings in yeast, however, demonstrate a major role for a DEP domain in mediating the interaction of an RGS protein to the C-terminal tail of a GPCR, thus placing RGS in close proximity with its substrate G protein alpha subunit [6-7].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
GATOR complex protein NPRL3
GTP-binding protein Gtr1
Schizosaccharomyces pombe LAM4, Human LAMTOR5 ortholog-
Schizosaccharomyces pombe LAM3, Human LAMTOR3 ortholog-
Schizosaccharomyces pombe LAM2, Human LAMTOR2 ortholog
Schizosaccharomyces pombe LAM1, Human LAMTOR1 ortholog
GTP-binding protein Gtr2
GATOR complex protein NPRL2
GATOR complex protein DEPDC5