8FVH | pdb_00008fvh

Pseudomonas phage E217 neck (portal, head-to-tail connector, collar and gateway proteins)

External Resource: Annotation

Protein Family Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AA [auth U], BA [auth X], CA [auth a], DA [auth d], EA [auth e], AA [auth U], BA [auth X], CA [auth a], DA [auth d], EA [auth e], FA [auth f], GA [auth g], HA [auth h], IA [auth i], JA [auth j], Y [auth O], Z [auth R]	PF06381	Phage portal protein (Phage_portal_3)	Phage portal protein	-	Family
M [auth N], N [auth Q], O [auth T], P [auth W], Q [auth Z], M [auth N], N [auth Q], O [auth T], P [auth W], Q [auth Z], R [auth c], S [auth G], T [auth H], U [auth I], V [auth J], W [auth K], X [auth L]	PF06381	Phage portal protein (Phage_portal_3)	Phage portal protein	-	Family
M [auth N], N [auth Q], O [auth T], P [auth W], Q [auth Z], M [auth N], N [auth Q], O [auth T], P [auth W], Q [auth Z], R [auth c], S [auth G], T [auth H], U [auth I], V [auth J], W [auth K], X [auth L]	PF13262	Protein of unknown function (DUF4054) (DUF4054)	Protein of unknown function (DUF4054)	-	Family
G [auth M], H [auth P], I [auth S], J [auth V], K [auth Y], G [auth M], H [auth P], I [auth S], J [auth V], K [auth Y], L [auth b]	PF22756	E217 gateway protein gp29 (E217_gp29)	E217 gateway protein gp29	-	Family
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F	PF06381	Phage portal protein (Phage_portal_3)	Phage portal protein	-	Family
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F	PF13262	Protein of unknown function (DUF4054) (DUF4054)	Protein of unknown function (DUF4054)	-	Family
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F	PF22755	E217 collar protein gp28 (E217_gp28)	E217 collar protein gp28	E217 is a Pseudomonas phage used in an experimental cocktail to eradicate cystic fibrosis-associated Pseudomonas aeruginosa. The collar protein gp28 is located at the neck of the E217 virion. Gp28 consists of a small beta-barrel decorated by an alpha ...	E217 is a Pseudomonas phage used in an experimental cocktail to eradicate cystic fibrosis-associated Pseudomonas aeruginosa. The collar protein gp28 is located at the neck of the E217 virion. Gp28 consists of a small beta-barrel decorated by an alpha-helix and two wing-like lateral extensions. Six collar proteins pack under the head-to-tail dodecamer with gp28 N-helix positioned orthogonal to two gp27 subunits. On the opposite side of the gp28 barrel, the wing-like extensions contact two gateway subunits [1].	Domain
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F	PF22756	E217 gateway protein gp29 (E217_gp29)	E217 gateway protein gp29	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth U], BA [auth X], CA [auth a], DA [auth d], EA [auth e], AA [auth U], BA [auth X], CA [auth a], DA [auth d], EA [auth e], FA [auth f], GA [auth g], HA [auth h], IA [auth i], JA [auth j], Y [auth O], Z [auth R]	IPR024459	Anti-CBASS protein Acb1-like, N-terminal domain	Domain
AA [auth U], BA [auth X], CA [auth a], DA [auth d], EA [auth e], AA [auth U], BA [auth X], CA [auth a], DA [auth d], EA [auth e], FA [auth f], GA [auth g], HA [auth h], IA [auth i], JA [auth j], Y [auth O], Z [auth R]	IPR041595	Inorganic pyrophosphatase domain	Domain
M [auth N], N [auth Q], O [auth T], P [auth W], Q [auth Z], M [auth N], N [auth Q], O [auth T], P [auth W], Q [auth Z], R [auth c], S [auth G], T [auth H], U [auth I], V [auth J], W [auth K], X [auth L]	IPR025127	Protein of unknown function DUF4054	Family
G [auth M], H [auth P], I [auth S], J [auth V], K [auth Y], G [auth M], H [auth P], I [auth S], J [auth V], K [auth Y], L [auth b]	IPR054447	Gateway protein gp29-like	Family
A [auth C], B [auth A], C [auth B], D, E, A [auth C], B [auth A], C [auth B], D, E, F	IPR054441	Collar protein gp28-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.