8FIZ | pdb_00008fiz

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth AI]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
H [auth AH]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
F [auth AF]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
DB [auth DG]SCOP2B SuperfamilyRibosomal protein L10-like 8079773 3000665 SCOP2B (2022-06-29)
CB [auth DF]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8096370 3000713 SCOP2B (2022-06-29)
BB [auth DE]SCOP2B SuperfamilyL28p-like 8035424 3001966 SCOP2B (2022-06-29)
AB [auth DD]SCOP2B SuperfamilyRibosomal L27 protein-like 8096338 3000539 SCOP2B (2022-06-29)
ZA [auth DC]SCOP2B SuperfamilyRibosomal protein L25-like 8042538 3001161 SCOP2B (2022-06-29)
YA [auth DB]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096358 3000334 SCOP2B (2022-06-29)
XA [auth DA]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8035415 3000210 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
WA [auth BZ]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
VA [auth BY]SCOP2B Superfamilyl21p-like 8096354 3002005 SCOP2B (2022-06-29)
UA [auth BX]SCOP2B SuperfamilyRibosomal protein L20 8096382 3000563 SCOP2B (2022-06-29)
TA [auth BW]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8096364 3000334 SCOP2B (2022-06-29)
SA [auth BV]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8035409 3000995 SCOP2B (2022-06-29)
RA [auth BU]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
QA [auth BT]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8070553 3001045 SCOP2B (2022-06-29)
PA [auth BS]SCOP2B Superfamily50S Ribosomal protein L14-like 8103358 3000433 SCOP2B (2022-06-29)
OA [auth BR]SCOP2B SuperfamilyRibosomal protein L13 8096350 3001134 SCOP2B (2022-06-29)
NA [auth BQ]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
D [auth AD]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
MA [auth BP]SCOP2B SuperfamilyRibosomal protein L36 8035391 3001346 SCOP2B (2022-06-29)
LA [auth BO]SCOP2B SuperfamilyL35p-like 8035388 3000790 SCOP2B (2022-06-29)
JA [auth BM]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096380 3001320 SCOP2B (2022-06-29)
IA [auth BL]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like 8032963 3000950 SCOP2B (2022-06-29)
IA [auth BL]SCOP2B SuperfamilyRibosomal protein L11, C-terminal domain 8032961 3001186 SCOP2B (2022-06-29)
HA [auth BK]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8032958 3000329 SCOP2B (2022-06-29)
HA [auth BK]SCOP2B SuperfamilyL9 N-domain-like 8032960 3000338 SCOP2B (2022-06-29)
GA [auth BJ]SCOP2B SuperfamilyRibosomal protein L6 8035398 3000724 SCOP2B (2022-06-29)
GA [auth BJ]SCOP2B SuperfamilyRibosomal protein L6 8035397 3000724 SCOP2B (2022-06-29)
FA [auth BI]SCOP2B SuperfamilyZn-binding ribosomal proteins 8096362 3001320 SCOP2B (2022-06-29)
EA [auth BH]SCOP2B SuperfamilyTranslational machinery components 8032969 3000571 SCOP2B (2022-06-29)
DA [auth BG]SCOP2B SuperfamilyRL5-like 8096352 3001709 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
CA [auth BF]SCOP2B SuperfamilyRibosomal protein L4 8096356 3001146 SCOP2B (2022-06-29)
BA [auth BE]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
AA [auth BD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
AA [auth BD]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
V [auth AV]SCOP2B SuperfamilyL28p-like 8032740 3001966 SCOP2B (2022-06-29)
U [auth AU]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
S [auth AS]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
R [auth AR]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
Q [auth AQ]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
O [auth AO]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
N [auth AN]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
M [auth AM]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
L [auth AL]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
K [auth AK]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
J [auth AJ]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth AI]F_UNCLASSIFIEDe8fizAI1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: F_UNCLASSIFIEDECOD (1.6)
H [auth AH]F_UNCLASSIFIEDe8fizAH1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: F_UNCLASSIFIEDECOD (1.6)
G [auth AG]F_UNCLASSIFIEDe8fizAG1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: F_UNCLASSIFIEDECOD (1.6)
G [auth AG]F_UNCLASSIFIEDe8fizAG2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: F_UNCLASSIFIEDECOD (1.6)
F [auth AF]F_UNCLASSIFIEDe8fizAF1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: F_UNCLASSIFIEDECOD (1.6)
DB [auth DG]F_UNCLASSIFIEDe8fizDG1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: F_UNCLASSIFIEDECOD (1.6)
CB [auth DF]F_UNCLASSIFIEDe8fizDF1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: F_UNCLASSIFIEDECOD (1.6)
BB [auth DE]F_UNCLASSIFIEDe8fizDE1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: F_UNCLASSIFIEDECOD (1.6)
AB [auth DD]F_UNCLASSIFIEDe8fizDD1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: F_UNCLASSIFIEDECOD (1.6)
ZA [auth DC]F_UNCLASSIFIEDe8fizDC1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: F_UNCLASSIFIEDECOD (1.6)
YA [auth DB]F_UNCLASSIFIEDe8fizDB1 A: beta barrelsX: SH3H: SH3T: SH3F: F_UNCLASSIFIEDECOD (1.6)
XA [auth DA]F_UNCLASSIFIEDe8fizDA1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: F_UNCLASSIFIEDECOD (1.6)
E [auth AE]F_UNCLASSIFIEDe8fizAE1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: F_UNCLASSIFIEDECOD (1.6)
WA [auth BZ]F_UNCLASSIFIEDe8fizBZ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: F_UNCLASSIFIEDECOD (1.6)
VA [auth BY]F_UNCLASSIFIEDe8fizBY1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: F_UNCLASSIFIEDECOD (1.6)
UA [auth BX]F_UNCLASSIFIEDe8fizBX1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: F_UNCLASSIFIEDECOD (1.6)
TA [auth BW]F_UNCLASSIFIEDe8fizBW1 A: beta barrelsX: SH3H: SH3T: SH3F: F_UNCLASSIFIEDECOD (1.6)
SA [auth BV]F_UNCLASSIFIEDe8fizBV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: F_UNCLASSIFIEDECOD (1.6)
RA [auth BU]F_UNCLASSIFIEDe8fizBU1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: F_UNCLASSIFIEDECOD (1.6)
QA [auth BT]F_UNCLASSIFIEDe8fizBT1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: F_UNCLASSIFIEDECOD (1.6)
PA [auth BS]F_UNCLASSIFIEDe8fizBS1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: F_UNCLASSIFIEDECOD (1.6)
OA [auth BR]F_UNCLASSIFIEDe8fizBR1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: F_UNCLASSIFIEDECOD (1.6)
NA [auth BQ]F_UNCLASSIFIEDe8fizBQ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: F_UNCLASSIFIEDECOD (1.6)
D [auth AD]F_UNCLASSIFIEDe8fizAD1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: F_UNCLASSIFIEDECOD (1.6)
MA [auth BP]F_UNCLASSIFIEDe8fizBP1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: F_UNCLASSIFIEDECOD (1.6)
LA [auth BO]F_UNCLASSIFIEDe8fizBO1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: F_UNCLASSIFIEDECOD (1.6)
KA [auth BN]F_UNCLASSIFIEDe8fizBN1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: F_UNCLASSIFIEDECOD (1.6)
JA [auth BM]F_UNCLASSIFIEDe8fizBM1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
IA [auth BL]F_UNCLASSIFIEDe8fizBL2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: F_UNCLASSIFIEDECOD (1.6)
IA [auth BL]F_UNCLASSIFIEDe8fizBL1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: F_UNCLASSIFIEDECOD (1.6)
HA [auth BK]F_UNCLASSIFIEDe8fizBK1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: F_UNCLASSIFIEDECOD (1.6)
HA [auth BK]F_UNCLASSIFIEDe8fizBK2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: F_UNCLASSIFIEDECOD (1.6)
GA [auth BJ]F_UNCLASSIFIEDe8fizBJ1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: F_UNCLASSIFIEDECOD (1.6)
FA [auth BI]F_UNCLASSIFIEDe8fizBI1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
EA [auth BH]F_UNCLASSIFIEDe8fizBH1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
DA [auth BG]F_UNCLASSIFIEDe8fizBG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: F_UNCLASSIFIEDECOD (1.6)
C [auth AC]F_UNCLASSIFIEDe8fizAC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: F_UNCLASSIFIEDECOD (1.6)
CA [auth BF]F_UNCLASSIFIEDe8fizBF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: F_UNCLASSIFIEDECOD (1.6)
BA [auth BE]F_UNCLASSIFIEDe8fizBE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: F_UNCLASSIFIEDECOD (1.6)
AA [auth BD]F_UNCLASSIFIEDe8fizBD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: F_UNCLASSIFIEDECOD (1.6)
AA [auth BD]F_UNCLASSIFIEDe8fizBD1 A: beta barrelsX: SH3H: SH3T: SH3F: F_UNCLASSIFIEDECOD (1.6)
V [auth AV]F_UNCLASSIFIEDe8fizAV1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: F_UNCLASSIFIEDECOD (1.6)
U [auth AU]F_UNCLASSIFIEDe8fizAU1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: F_UNCLASSIFIEDECOD (1.6)
T [auth AT]F_UNCLASSIFIEDe8fizAT1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: F_UNCLASSIFIEDECOD (1.6)
B [auth AB]F_UNCLASSIFIEDe8fizAB1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: F_UNCLASSIFIEDECOD (1.6)
S [auth AS]F_UNCLASSIFIEDe8fizAS1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: F_UNCLASSIFIEDECOD (1.6)
R [auth AR]F_UNCLASSIFIEDe8fizAR1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: F_UNCLASSIFIEDECOD (1.6)
Q [auth AQ]F_UNCLASSIFIEDe8fizAQ2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: F_UNCLASSIFIEDECOD (1.6)
Q [auth AQ]F_UNCLASSIFIEDe8fizAQ1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: F_UNCLASSIFIEDECOD (1.6)
P [auth AP]F_UNCLASSIFIEDe8fizAP1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: F_UNCLASSIFIEDECOD (1.6)
P [auth AP]F_UNCLASSIFIEDe8fizAP2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: F_UNCLASSIFIEDECOD (1.6)
O [auth AO]F_UNCLASSIFIEDe8fizAO1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: F_UNCLASSIFIEDECOD (1.6)
N [auth AN]F_UNCLASSIFIEDe8fizAN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: F_UNCLASSIFIEDECOD (1.6)
M [auth AM]F_UNCLASSIFIEDe8fizAM1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
L [auth AL]F_UNCLASSIFIEDe8fizAL1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: F_UNCLASSIFIEDECOD (1.6)
K [auth AK]F_UNCLASSIFIEDe8fizAK1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: F_UNCLASSIFIEDECOD (1.6)
J [auth AJ]F_UNCLASSIFIEDe8fizAJ1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth AI]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
I [auth AI]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
H [auth AH]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
G [auth AG]PF07650KH domain (KH_2)KH domainDomain
G [auth AG]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
F [auth AF]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
DB [auth DG]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
CB [auth DF]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
BB [auth DE]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
ZA [auth DC]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
YA [auth DB]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
YA [auth DB]PF00467KOW motif (KOW)KOW motif- Family
XA [auth DA]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
E [auth AE]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
WA [auth BZ]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
VA [auth BY]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
UA [auth BX]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
TA [auth BW]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
SA [auth BV]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
RA [auth BU]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
QA [auth BT]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
PA [auth BS]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
OA [auth BR]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
NA [auth BQ]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
D [auth AD]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
MA [auth BP]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
LA [auth BO]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
KA [auth BN]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
JA [auth BM]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
IA [auth BL]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
IA [auth BL]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
HA [auth BK]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
HA [auth BK]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
GA [auth BJ]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
FA [auth BI]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
EA [auth BH]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
DA [auth BG]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
DA [auth BG]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
C [auth AC]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
CA [auth BF]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
BA [auth BE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
AA [auth BD]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
AA [auth BD]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
V [auth AV]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
U [auth AU]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
B [auth AB]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
S [auth AS]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
R [auth AR]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
Q [auth AQ]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
P [auth AP]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
P [auth AP]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
O [auth AO]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
N [auth AN]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
M [auth AM]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
K [auth AK]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
J [auth AJ]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth AI]30S ribosomal protein S4
H [auth AH]30S ribosomal protein S10
G [auth AG]30S ribosomal protein S3
F [auth AF]30S ribosomal protein S14
DB [auth DG]50S ribosomal protein L10
CB [auth DF]50S ribosomal protein L29
BB [auth DE]50S ribosomal protein L28
AB [auth DD]50S ribosomal protein L27
ZA [auth DC]50S ribosomal protein L25
YA [auth DB]50S ribosomal protein L24
XA [auth DA]50S ribosomal protein L23
E [auth AE]30S ribosomal protein S13
WA [auth BZ]50S ribosomal protein L22
VA [auth BY]Ribosomal protein L21
UA [auth BX]50S ribosomal protein L20
TA [auth BW]50S ribosomal protein L19
SA [auth BV]50S ribosomal protein L17
RA [auth BU]50S ribosomal protein L16
QA [auth BT]50S ribosomal protein L15
PA [auth BS]50S ribosomal protein L14
OA [auth BR]50S ribosomal protein L13
NA [auth BQ]50S ribosomal protein L30
D [auth AD]30S ribosomal protein S19
MA [auth BP]50S ribosomal protein L36
LA [auth BO]50S ribosomal protein L35
KA [auth BN]50S ribosomal protein L34
JA [auth BM]50S ribosomal protein L32
IA [auth BL]50S ribosomal protein L11
HA [auth BK]50S ribosomal protein L9
GA [auth BJ]50S ribosomal protein L6
FA [auth BI]50S ribosomal protein L33
EA [auth BH]50S ribosomal protein L18
DA [auth BG]50S ribosomal protein L5
C [auth AC]30S ribosomal protein S12
CA [auth BF]50S ribosomal protein L4
BA [auth BE]50S ribosomal protein L3
AA [auth BD]50S ribosomal protein L2
Z [auth BC]5s rRNA---
Y [auth BB]P-site tRNA---
X [auth BA]23S rRNA---
W [auth AW]mRNA---
V [auth AV]50S ribosomal protein L31
U [auth AU]30S ribosomal protein S21
T [auth AT]30S ribosomal protein S18
B [auth AB]30S ribosomal protein S20
S [auth AS]30S ribosomal protein S17
R [auth AR]30S ribosomal protein S15
Q [auth AQ]30S ribosomal protein S8
P [auth AP]30S ribosomal protein S5
O [auth AO]30S ribosomal protein S16
N [auth AN]30S ribosomal protein S6
M [auth AM]30S ribosomal protein S11
L [auth AL]30S ribosomal protein S7
K [auth AK]30S ribosomal protein S9
J [auth AJ]30S ribosomal protein S2
A [auth AA]16S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth AI]IPR002942RNA-binding S4 domainDomain
I [auth AI]IPR022801Small ribosomal subunit protein uS4Family
I [auth AI]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
I [auth AI]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
I [auth AI]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
I [auth AI]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
H [auth AH]IPR027486Small ribosomal subunit protein uS10 domainDomain
H [auth AH]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
H [auth AH]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
H [auth AH]IPR001848Small ribosomal subunit protein uS10Family
G [auth AG]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
G [auth AG]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
G [auth AG]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
G [auth AG]IPR004087K Homology domainDomain
G [auth AG]IPR004044K Homology domain, type 2Domain
G [auth AG]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
G [auth AG]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
G [auth AG]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
F [auth AF]IPR001209Small ribosomal subunit protein uS14Family
F [auth AF]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
F [auth AF]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
DB [auth DG]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
DB [auth DG]IPR001790Large ribosomal subunit protein uL10Family
DB [auth DG]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
DB [auth DG]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
DB [auth DG]IPR022973Large ribosomal subunit protein uL10, bacteriaFamily
CB [auth DF]IPR050063Universal ribosomal protein uL29Family
CB [auth DF]IPR001854Large ribosomal subunit protein uL29Family
CB [auth DF]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
CB [auth DF]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
BB [auth DE]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
BB [auth DE]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
BB [auth DE]IPR026569Large ribosomal subunit protein bL28Family
BB [auth DE]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AB [auth DD]IPR001684Large ribosomal subunit protein bL27Family
AB [auth DD]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
ZA [auth DC]IPR020055Ribosomal protein bL25, short-formFamily
ZA [auth DC]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
ZA [auth DC]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
ZA [auth DC]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
ZA [auth DC]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
YA [auth DB]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth DB]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
YA [auth DB]IPR003256Large ribosomal subunit protein uL24Family
YA [auth DB]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
YA [auth DB]IPR005824KOWDomain
YA [auth DB]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
XA [auth DA]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XA [auth DA]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
XA [auth DA]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
XA [auth DA]IPR013025Large ribosomal subunit protein uL23-likeFamily
E [auth AE]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
E [auth AE]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
E [auth AE]IPR001892Small ribosomal subunit protein uS13Family
E [auth AE]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
E [auth AE]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
WA [auth BZ]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
WA [auth BZ]IPR001063Large ribosomal subunit protein uL22Family
WA [auth BZ]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
WA [auth BZ]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
WA [auth BZ]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
VA [auth BY]IPR028909Large ribosomal subunit protein bL21-likeFamily
VA [auth BY]IPR001787Large ribosomal subunit protein bL21Family
VA [auth BY]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
VA [auth BY]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
UA [auth BX]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
UA [auth BX]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
UA [auth BX]IPR005813Large ribosomal subunit protein bL20Family
TA [auth BW]IPR001857Large ribosomal subunit protein bL19Family
TA [auth BW]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
TA [auth BW]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
TA [auth BW]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
SA [auth BV]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
SA [auth BV]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
SA [auth BV]IPR000456Large ribosomal subunit protein bL17Family
RA [auth BU]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
RA [auth BU]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
RA [auth BU]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
RA [auth BU]IPR016180Large ribosomal subunit protein uL16 domainDomain
RA [auth BU]IPR047873Large ribosomal subunit protein uL16Family
QA [auth BT]IPR021131Large ribosomal subunit protein uL15/eL18Domain
QA [auth BT]IPR030878Large ribosomal subunit protein uL15Family
QA [auth BT]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
QA [auth BT]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QA [auth BT]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
PA [auth BS]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
PA [auth BS]IPR000218Large ribosomal subunit protein uL14Family
PA [auth BS]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
PA [auth BS]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
OA [auth BR]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
OA [auth BR]IPR005822Large ribosomal subunit protein uL13Family
OA [auth BR]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
OA [auth BR]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
NA [auth BQ]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
NA [auth BQ]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
NA [auth BQ]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
NA [auth BQ]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
D [auth AD]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
D [auth AD]IPR002222Small ribosomal subunit protein uS19Family
D [auth AD]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
D [auth AD]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
MA [auth BP]IPR000473Large ribosomal subunit protein bL36Family
MA [auth BP]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
LA [auth BO]IPR021137Large ribosomal subunit protein bL35-likeFamily
LA [auth BO]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
LA [auth BO]IPR001706Large ribosomal subunit protein bL35Family
LA [auth BO]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
KA [auth BN]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
KA [auth BN]IPR000271Large ribosomal subunit protein bL34Family
JA [auth BM]IPR002677Large ribosomal subunit protein bL32Family
JA [auth BM]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
JA [auth BM]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
IA [auth BL]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
IA [auth BL]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
IA [auth BL]IPR000911Ribosomal protein uL11Family
IA [auth BL]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
IA [auth BL]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
IA [auth BL]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
IA [auth BL]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
HA [auth BK]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
HA [auth BK]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
HA [auth BK]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
HA [auth BK]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
HA [auth BK]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
HA [auth BK]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
HA [auth BK]IPR000244Large ribosomal subunit protein bL9Family
GA [auth BJ]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
GA [auth BJ]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
GA [auth BJ]IPR000702Large ribosomal subunit protein uL6-likeFamily
GA [auth BJ]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
GA [auth BJ]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
FA [auth BI]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth BI]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
FA [auth BI]IPR001705Large ribosomal subunit protein bL33Family
FA [auth BI]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
EA [auth BH]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
EA [auth BH]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
DA [auth BG]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
DA [auth BG]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
DA [auth BG]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
DA [auth BG]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
DA [auth BG]IPR002132Large ribosomal subunit protein uL5Family
DA [auth BG]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
C [auth AC]IPR005679Ribosomal protein uS12, bacteriaFamily
C [auth AC]IPR006032Small ribosomal subunit protein uS12Family
C [auth AC]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth BF]IPR013005Large ribosomal subunit protein uL4-likeFamily
CA [auth BF]IPR002136Large ribosomal subunit protein uL4Family
CA [auth BF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
BA [auth BE]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
BA [auth BE]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
BA [auth BE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
BA [auth BE]IPR000597Large ribosomal subunit protein uL3Family
AA [auth BD]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
AA [auth BD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
AA [auth BD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth BD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth BD]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
AA [auth BD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth BD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
AA [auth BD]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
AA [auth BD]IPR002171Large ribosomal subunit protein uL2Family
V [auth AV]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
V [auth AV]IPR027491Large ribosomal subunit protein bL31 type AFamily
V [auth AV]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
V [auth AV]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
U [auth AU]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
U [auth AU]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
U [auth AU]IPR001911Small ribosomal subunit protein bS21Family
T [auth AT]IPR001648Small ribosomal subunit protein bS18Family
T [auth AT]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
T [auth AT]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
B [auth AB]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
B [auth AB]IPR002583Small ribosomal subunit protein bS20Family
S [auth AS]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
S [auth AS]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
S [auth AS]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
S [auth AS]IPR000266Small ribosomal subunit protein uS17Family
R [auth AR]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
R [auth AR]IPR000589Small ribosomal subunit protein uS15Family
R [auth AR]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
Q [auth AQ]IPR000630Small ribosomal subunit protein uS8Family
Q [auth AQ]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
Q [auth AQ]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
P [auth AP]IPR000851Small ribosomal subunit protein uS5Family
P [auth AP]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
P [auth AP]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
P [auth AP]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
P [auth AP]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
P [auth AP]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
P [auth AP]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
O [auth AO]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
O [auth AO]IPR000307Small ribosomal subunit protein bS16Family
O [auth AO]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
N [auth AN]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
N [auth AN]IPR000529Small ribosomal subunit protein bS6Family
N [auth AN]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
N [auth AN]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
N [auth AN]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
M [auth AM]IPR001971Small ribosomal subunit protein uS11Family
M [auth AM]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
M [auth AM]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
M [auth AM]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
L [auth AL]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
L [auth AL]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
L [auth AL]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
L [auth AL]IPR000235Small ribosomal subunit protein uS7Family
L [auth AL]IPR023798Small ribosomal subunit protein uS7 domainDomain
K [auth AK]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
K [auth AK]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
K [auth AK]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
K [auth AK]IPR000754Small ribosomal subunit protein uS9Family
K [auth AK]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
J [auth AJ]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
J [auth AJ]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
J [auth AJ]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
J [auth AJ]IPR001865Small ribosomal subunit protein uS2Family