8FD7
Structure of the human L-type voltage-gated calcium channel Cav1.2 complexed with gabapentin
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth K] | PF16905 | e8fd7K3 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF16905 | ECOD (1.6) |
B [auth K] | PF00520 | e8fd7K5 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: PF00520 | ECOD (1.6) |
B [auth K] | PF08763 | e8fd7K4 | A: extended segments | X: Voltage gated calcium channel IQ domain (From Topology) | H: Voltage gated calcium channel IQ domain (From Topology) | T: Voltage gated calcium channel IQ domain | F: PF08763 | ECOD (1.6) |
C | PF00625 | e8fd7C1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00625 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth K] | PF16905 | Voltage-dependent L-type calcium channel, IQ-associated (GPHH) | Voltage-dependent L-type calcium channel, IQ-associated | - | Family |
B [auth K] | PF08763 | Voltage gated calcium channel IQ domain (Ca_chan_IQ) | Voltage gated calcium channel IQ domain | Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin [1]. ... | Domain |
B [auth K] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
PF00625 | Guanylate kinase (Guanylate_kin) | Guanylate kinase | - | Domain | |
A [auth D] | PF08399 | VWA N-terminal (VWA_N) | VWA N-terminal | - | Family |
A [auth D] | PF00092 | von Willebrand factor type A domain (VWA) | von Willebrand factor type A domain | - | Domain |
A [auth D] | PF08473 | Neuronal voltage-dependent calcium channel alpha 2acd (VGCC_alpha2) | Neuronal voltage-dependent calcium channel alpha 2acd | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Voltage-sensitive calcium channel |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Calcium Ion-Selective | Cav1.2 L-type voltage-gated calcium channel with bound gabapentin |