8FCB | pdb_00008fcb

Cryo-EM structure of the human TRPV4 - RhoA in complex with GSK1016790A


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B SuperfamilyRas-like P-loop GTPases 8057414 3002022 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRas-like P-loop GTPases 8057414 3002022 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRas-like P-loop GTPases 8057414 3002022 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRas-like P-loop GTPases 8057414 3002022 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyAnkyrin repeat 8100504 3000154 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAnkyrin repeat 8100504 3000154 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAnkyrin repeat 8100504 3000154 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAnkyrin repeat 8100504 3000154 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HGlyco_hydro_43e8fcbH1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v294.1)
GGlyco_hydro_43e8fcbG1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v294.1)
FGlyco_hydro_43e8fcbF1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v294.1)
EGlyco_hydro_43e8fcbE1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v294.1)
DGlyco_hydro_43e8fcbD1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v294.1)
CGlyco_hydro_43e8fcbC1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v294.1)
BGlyco_hydro_43e8fcbB1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v294.1)
AGlyco_hydro_43e8fcbA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Glyco_hydro_43ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E, F, G, H
PF00071Ras family (Ras)Ras familyIncludes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ...Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].
Domain
A, B, C, D
PF00023Ankyrin repeat (Ank)Ankyrin repeat- Repeat
A, B, C, D
PF00520Ion transport protein (Ion_trans)Ion transport protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E, F, G, H
Transforming protein RhoA
A, B, C, D
Transient receptor potential cation channel subfamily V member 4

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E, F, G, H
PharosP61586
A, B, C, D
PharosQ9HBA0

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
MemProtMDAnnotated as membrane protein by MemProtMD