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8F5Y
Crystal structure of pregnane X receptor ligand binding domain complexed with JQ1
External Resource: Annotation
Domain Annotation: SCOP2 Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Domain Annotation: SCOP2 Classification
SCOP2 Database Homepage
Chains
Type
Family Name
Domain Identifier
Family Identifier
Provenance Source (Version)
A
SCOP2B Superfamily
Nuclear receptor ligand-binding domain
8036943
3001442
SCOP2B (2022-06-29)
B
SCOP2B Superfamily
Nuclear receptor ligand-binding domain
8036943
3001442
SCOP2B (2022-06-29)
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
,
B
Nuclear receptor subfamily 1 group I member 2
DNA binding
sequence-specific DNA binding
binding
double-stranded DNA binding
nucleic acid binding
RNA polymerase II transcription regulatory region sequence-specific DNA binding
cis-regulatory region sequence-specific DNA binding
sequence-specific double-stranded DNA binding
transcription cis-regulatory region binding
organic cyclic compound binding
transcription regulatory region nucleic acid binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA-binding transcription factor activity, RNA polymerase II-specific
transcription regulator activity
DNA binding
sequence-specific DNA binding
binding
double-stranded DNA binding
nucleic acid binding
RNA polymerase II transcription regulatory region sequence-specific DNA binding
cis-regulatory region sequence-specific DNA binding
sequence-specific double-stranded DNA binding
transcription cis-regulatory region binding
organic cyclic compound binding
transcription regulatory region nucleic acid binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
DNA-binding transcription factor activity, RNA polymerase II-specific
transcription regulator activity
DNA-binding transcription factor activity
nuclear receptor activity
molecular transducer activity
ligand-activated transcription factor activity
signaling receptor activity
transcription factor binding
RNA polymerase II-specific DNA-binding transcription factor binding
nuclear receptor binding
protein binding
DNA-binding transcription factor binding
cation binding
transition metal ion binding
zinc ion binding
ion binding
metal ion binding
small molecule binding
DNA-binding transcription activator activity, RNA polymerase II-specific
DNA-binding transcription activator activity
Less
regulation of cellular process
negative regulation of biological process
negative regulation of cellular metabolic process
regulation of primary metabolic process
negative regulation of RNA biosynthetic process
nucleobase-containing compound metabolic process
DNA-templated transcription
regulation of RNA metabolic process
organic substance biosynthetic process
negative regulation of nucleobase-containing compound metabolic process
regulation of nucleobase-containing compound metabolic process
negative regulation of DNA-templated transcription
regulation of biological process
cellular metabolic process
regulation of cellular process
negative regulation of biological process
negative regulation of cellular metabolic process
regulation of primary metabolic process
negative regulation of RNA biosynthetic process
nucleobase-containing compound metabolic process
DNA-templated transcription
regulation of RNA metabolic process
organic substance biosynthetic process
negative regulation of nucleobase-containing compound metabolic process
regulation of nucleobase-containing compound metabolic process
negative regulation of DNA-templated transcription
regulation of biological process
cellular metabolic process
negative regulation of metabolic process
primary metabolic process
regulation of cellular metabolic process
negative regulation of cellular biosynthetic process
organic cyclic compound metabolic process
regulation of gene expression
biosynthetic process
negative regulation of macromolecule biosynthetic process
organic cyclic compound biosynthetic process
metabolic process
regulation of macromolecule biosynthetic process
macromolecule metabolic process
regulation of DNA-templated transcription
regulation of metabolic process
negative regulation of RNA metabolic process
cellular biosynthetic process
RNA metabolic process
RNA biosynthetic process
nucleic acid biosynthetic process
organic substance metabolic process
negative regulation of cellular process
regulation of RNA biosynthetic process
negative regulation of macromolecule metabolic process
regulation of biosynthetic process
biological regulation
regulation of macromolecule metabolic process
nucleobase-containing compound biosynthetic process
gene expression
macromolecule biosynthetic process
nucleic acid metabolic process
regulation of cellular biosynthetic process
negative regulation of biosynthetic process
cellular process
developmental process
cellular developmental process
cell differentiation
positive regulation of biological process
positive regulation of cellular metabolic process
positive regulation of macromolecule biosynthetic process
positive regulation of metabolic process
positive regulation of biosynthetic process
positive regulation of macromolecule metabolic process
positive regulation of cellular process
positive regulation of gene expression
positive regulation of cellular biosynthetic process
localization
xenobiotic transport
transport
establishment of localization
cellular response to stimulus
response to stimulus
signaling
signal transduction
cell communication
steroid metabolic process
lipid metabolic process
cellular response to chemical stimulus
response to chemical
cellular response to xenobiotic stimulus
xenobiotic metabolic process
response to xenobiotic stimulus
catabolic process
xenobiotic catabolic process
cellular catabolic process
positive regulation of nucleobase-containing compound metabolic process
positive regulation of RNA metabolic process
positive regulation of DNA-templated transcription
positive regulation of RNA biosynthetic process
transcription by RNA polymerase II
regulation of transcription by RNA polymerase II
negative regulation of transcription by RNA polymerase II
positive regulation of transcription by RNA polymerase II
Less
protein-containing complex
transcription regulator complex
membrane-bounded organelle
intracellular anatomical structure
nucleus
membrane-enclosed lumen
intracellular membrane-bounded organelle
cellular anatomical entity
intracellular organelle lumen
intracellular organelle
nucleoplasm
organelle lumen
organelle
nuclear lumen
protein-containing complex
transcription regulator complex
membrane-bounded organelle
intracellular anatomical structure
nucleus
membrane-enclosed lumen
intracellular membrane-bounded organelle
cellular anatomical entity
intracellular organelle lumen
intracellular organelle
nucleoplasm
organelle lumen
organelle
nuclear lumen
protein-DNA complex
intracellular non-membrane-bounded organelle
chromatin
chromosome
non-membrane-bounded organelle
cytoskeleton
intermediate filament cytoskeleton
nuclear body
Less
C
,
D
Nuclear receptor coactivator 1
transcription coactivator activity
transcription regulator activity
transcription coregulator activity
nuclear receptor coactivator activity
protein-macromolecule adaptor activity
molecular adaptor activity
protein binding
binding
protein dimerization activity
catalytic activity, acting on a protein
N-acetyltransferase activity
acyltransferase activity
transferase activity
peptide N-acetyltransferase activity
transcription coactivator activity
transcription regulator activity
transcription coregulator activity
nuclear receptor coactivator activity
protein-macromolecule adaptor activity
molecular adaptor activity
protein binding
binding
protein dimerization activity
catalytic activity, acting on a protein
N-acetyltransferase activity
acyltransferase activity
transferase activity
peptide N-acetyltransferase activity
histone acetyltransferase activity
acetyltransferase activity
peptide-lysine-N-acetyltransferase activity
histone modifying activity
acyltransferase activity, transferring groups other than amino-acyl groups
catalytic activity
N-acyltransferase activity
protein-containing complex binding
chromatin binding
DNA binding
sequence-specific DNA binding
sequence-specific double-stranded DNA binding
transcription cis-regulatory region binding
double-stranded DNA binding
organic cyclic compound binding
nucleic acid binding
RNA polymerase II transcription regulatory region sequence-specific DNA binding
transcription regulatory region nucleic acid binding
transcription factor binding
nuclear retinoic acid receptor binding
RNA polymerase II-specific DNA-binding transcription factor binding
nuclear receptor binding
nuclear retinoid X receptor binding
DNA-binding transcription factor binding
nuclear estrogen receptor binding
Less
developmental process
multicellular organismal process
gonad development
reproductive system development
reproductive process
sex differentiation
animal organ development
developmental process involved in reproduction
male gonad development
male sex differentiation
multicellular organism development
development of primary male sexual characteristics
development of primary sexual characteristics
anatomical structure development
reproductive structure development
developmental process
multicellular organismal process
gonad development
reproductive system development
reproductive process
sex differentiation
animal organ development
developmental process involved in reproduction
male gonad development
male sex differentiation
multicellular organism development
development of primary male sexual characteristics
development of primary sexual characteristics
anatomical structure development
reproductive structure development
system development
placenta development
chordate embryonic development
embryonic morphogenesis
labyrinthine layer development
embryo development
in utero embryonic development
embryonic placenta morphogenesis
labyrinthine layer morphogenesis
anatomical structure morphogenesis
embryonic placenta development
embryo development ending in birth or egg hatching
embryonic organ development
ovulation cycle
rhythmic process
estrous cycle
multicellular organismal reproductive process
response to organic substance
response to ketone
response to lipid
response to stimulus
response to endogenous stimulus
response to progesterone
response to oxygen-containing compound
response to hormone
response to steroid hormone
response to chemical
response to organic cyclic compound
regulation of biological process
positive regulation of programmed cell death
regulation of cellular process
regulation of apoptotic process
biological regulation
positive regulation of biological process
regulation of programmed cell death
cell death
positive regulation of apoptotic process
cellular process
apoptotic process
programmed cell death
positive regulation of cellular process
head development
brain development
nervous system development
cerebellum development
central nervous system development
metencephalon development
hindbrain development
behavior
male mating behavior
reproductive behavior
mating behavior
forebrain development
pallium development
cerebral cortex development
telencephalon development
cellular response to stimulus
intracellular receptor signaling pathway
signaling
cell communication
peroxisome proliferator activated receptor signaling pathway
signal transduction
mRNA transcription by RNA polymerase II
cellular biosynthetic process
RNA metabolic process
mRNA transcription
nucleobase-containing compound metabolic process
RNA biosynthetic process
DNA-templated transcription
nucleic acid biosynthetic process
organic substance metabolic process
transcription by RNA polymerase II
organic substance biosynthetic process
cellular metabolic process
primary metabolic process
nucleobase-containing compound biosynthetic process
gene expression
mRNA metabolic process
macromolecule biosynthetic process
nucleic acid metabolic process
organic cyclic compound metabolic process
biosynthetic process
organic cyclic compound biosynthetic process
metabolic process
macromolecule metabolic process
regulation of body fluid levels
secretion
transport
mammary gland development
gland development
establishment of localization
body fluid secretion
localization
lactation
regulation of biological quality
cellular response to chemical stimulus
response to Thyroglobulin triiodothyronine
cellular response to Thyroglobulin triiodothyronine
cellular response to nitrogen compound
response to peptide hormone
regulation of cellular response to insulin stimulus
cellular response to endogenous stimulus
cellular response to organic substance
cellular response to hormone stimulus
response to organonitrogen compound
cellular response to peptide hormone stimulus
response to nitrogen compound
cellular response to oxygen-containing compound
cellular response to organonitrogen compound
regulation of response to stimulus
response to insulin
cellular response to insulin stimulus
positive regulation of macromolecule biosynthetic process
regulation of primary metabolic process
positive regulation of metabolic process
regulation of RNA metabolic process
positive regulation of macromolecule metabolic process
regulation of nucleobase-containing compound metabolic process
regulation of transcription by RNA polymerase II
positive regulation of nucleobase-containing compound metabolic process
regulation of cellular metabolic process
positive regulation of transcription by RNA polymerase II
positive regulation of RNA metabolic process
regulation of gene expression
regulation of macromolecule biosynthetic process
regulation of DNA-templated transcription
regulation of metabolic process
positive regulation of DNA-templated transcription
positive regulation of cellular metabolic process
positive regulation of biosynthetic process
regulation of RNA biosynthetic process
regulation of biosynthetic process
regulation of macromolecule metabolic process
regulation of cellular biosynthetic process
positive regulation of RNA biosynthetic process
positive regulation of cellular biosynthetic process
hippocampus development
limbic system development
regulation of transcription from RNA polymerase II promoter by galactose
carbon catabolite regulation of transcription
positive regulation of transcription by galactose
cellular response to nutrient levels
carbon catabolite regulation of transcription from RNA polymerase II promoter
carbon catabolite activation of transcription from RNA polymerase II promoter
carbon catabolite activation of transcription
response to nutrient levels
regulation of transcription by galactose
response to nutrient
positive regulation of transcription from RNA polymerase II promoter by galactose
cellular response to nutrient
regulation of developmental process
connective tissue development
adipose tissue development
positive regulation of adipose tissue development
tissue development
positive regulation of developmental process
regulation of adipose tissue development
positive regulation of multicellular organismal process
regulation of multicellular organismal process
hypothalamus development
diencephalon development
response to retinoic acid
cellular developmental process
regulation of cell differentiation
positive regulation of neuron differentiation
neurogenesis
neuron differentiation
positive regulation of cell differentiation
cell differentiation
generation of neurons
regulation of neuron differentiation
thyroid hormone mediated signaling pathway
regulation of signal transduction
hormone-mediated signaling pathway
regulation of thyroid hormone mediated signaling pathway
regulation of signaling
regulation of cell communication
positive regulation of female receptivity
female mating behavior
regulation of female receptivity
response to estradiol
Less
intracellular anatomical structure
cytoplasm
cellular anatomical entity
cytosol
protein-containing complex
transcription regulator complex
intracellular organelle
protein-DNA complex
organelle
intracellular non-membrane-bounded organelle
chromatin
chromosome
non-membrane-bounded organelle
RNA polymerase II transcription regulator complex
intracellular anatomical structure
cytoplasm
cellular anatomical entity
cytosol
protein-containing complex
transcription regulator complex
intracellular organelle
protein-DNA complex
organelle
intracellular non-membrane-bounded organelle
chromatin
chromosome
non-membrane-bounded organelle
RNA polymerase II transcription regulator complex
membrane-bounded organelle
nucleus
nuclear protein-containing complex
intracellular membrane-bounded organelle
cell periphery
plasma membrane
membrane
membrane-enclosed lumen
intracellular organelle lumen
nucleoplasm
organelle lumen
nuclear lumen
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
,
B
IPR001628
Zinc finger, nuclear hormone receptor-type
Domain
A
,
B
IPR001723
Nuclear hormone receptor
Family
A
,
B
IPR013088
Zinc finger, NHR/GATA-type
Homologous Superfamily
A
,
B
IPR000536
Nuclear hormone receptor, ligand-binding domain
Domain
A
,
B
IPR035500
Nuclear hormone receptor-like domain superfamily
Homologous Superfamily
C
,
D
IPR010011
Nuclear receptor coactivator, DUF1518
Domain
C
,
D
IPR028819
Nuclear receptor coactivator 1, basic helix-loop-helix
Domain
C
,
D
IPR009110
Nuclear receptor coactivator, interlocking
Homologous Superfamily
C
,
D
IPR017426
Nuclear receptor coactivator
Family
C
,
D
IPR014935
Nuclear receptor coactivator, receptor-binding domain
Domain
C
,
D
IPR014920
Nuclear receptor coactivator, Ncoa-type, interlocking
Domain
C
,
D
IPR035965
PAS domain superfamily
Homologous Superfamily
C
,
D
IPR036638
Helix-loop-helix DNA-binding domain superfamily
Homologous Superfamily
C
,
D
IPR037077
Nuclear receptor coactivator, Ncoa-type, interlocking domain superfamily
Homologous Superfamily
C
,
D
IPR013767
PAS fold
Domain
C
,
D
IPR000014
PAS domain
Domain
C
,
D
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
Domain
Pharos: Disease Associations
Pharos Homepage Annotation
Chains
Drug Target  
Associated Disease
A
,
B
Pharos
: 
O75469
osteosarcoma
metabolic syndrome X
Barrett esophagus
granular cell carcinoma
Hepatomegaly
adenocarcinoma
esophageal cancer
female infertility
hypophosphatemia
diabetes mellitus
neonatal jaundice
obesity disorder
tubular adenocarcinoma
malignant pancreatic neoplasm
neoplasm of esophagus
osteosarcoma
metabolic syndrome X
Barrett esophagus
granular cell carcinoma
Hepatomegaly
adenocarcinoma
esophageal cancer
female infertility
hypophosphatemia
diabetes mellitus
neonatal jaundice
obesity disorder
tubular adenocarcinoma
malignant pancreatic neoplasm
neoplasm of esophagus
pancreatic intraductal papillary-mucinous neoplasm
cribriform carcinoma of breast
ulcerative colitis
pancreatic ductal adenocarcinoma
pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia
cholestasis
drug-induced liver injury
pancreatic intraductal papillary-mucinous carcinoma
cribriform carcinoma
esophageal adenocarcinoma
fatty liver disease
Less
C
,
D
Pharos
: 
Q15788
breast carcinoma
breast cancer
Mammary Neoplasms, Experimental
prostate cancer
endometriosis
ovarian cancer
psoriasis
adenoma
diffuse large B-cell lymphoma
glioblastoma
malignant glioma
astrocytic tumor
invasive ductal breast carcinoma
osteosarcoma
atypical teratoid rhabdoid tumor
breast carcinoma
breast cancer
Mammary Neoplasms, Experimental
prostate cancer
endometriosis
ovarian cancer
psoriasis
adenoma
diffuse large B-cell lymphoma
glioblastoma
malignant glioma
astrocytic tumor
invasive ductal breast carcinoma
osteosarcoma
atypical teratoid rhabdoid tumor
cancer
large cell medulloblastoma
myopathy
Less
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