8F5I | pdb_00008f5i

SARS-CoV-2 S2 helix epitope scaffold bound by antibody DH1057.1


SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth H],
E [auth X]
Heavy ChainIGHV1 -specialized acyl carrier proteinSAbDab (2025-11-28)
D [auth L],
F [auth Y]
Light ChainIGKV3 Kappaspecialized acyl carrier proteinSAbDab (2025-11-28)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth H],
E [auth X]
DH1057.1 HC---
D [auth L],
F [auth Y]
DH1057.1 LC---
A, B
Specialized acyl carrier protein