8EWB

Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth BA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8061280 3001397 SCOP2B (2022-06-29)
G [auth BI]SCOP2B Superfamily50S Ribosomal protein L14-like8053083 3000433 SCOP2B (2022-06-29)
I [auth BL]SCOP2B SuperfamilyNucleic acid-binding proteins8052738 3000135 SCOP2B (2022-06-29)
I [auth BL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052736 3002138 SCOP2B (2022-06-29)
P [auth Ba]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8096936 3000068 SCOP2B (2022-06-29)
T [auth BF]SCOP2B SuperfamilyRibosomal protein S78065999 3000799 SCOP2B (2022-06-29)
BA [auth BZ]SCOP2B SuperfamilyWinged helix DNA-binding domain8096934 3000034 SCOP2B (2022-06-29)
DA [auth Bd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8096926 3000068 SCOP2B (2022-06-29)
JA [auth AB]SCOP2B SuperfamilyTranslational proteins8078363 3000811 SCOP2B (2022-06-29)
PA [auth AE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053109 3000334 SCOP2B (2022-06-29)
RA [auth AG]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
UA [auth AJ]SCOP2B SuperfamilyRL5-like8105618 3001709 SCOP2B (2022-06-29)
XA [auth AN]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
YA [auth AO]SCOP2B SuperfamilyRibosomal protein L138066053 3001134 SCOP2B (2022-06-29)
AB [auth AQ]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095970 3001045 SCOP2B (2022-06-29)
FB [auth AV]SCOP2B Superfamily50S Ribosomal protein L14-like8103364 3000433 SCOP2B (2022-06-29)
JB [auth AZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053046 3000334 SCOP2B (2022-06-29)
PB [auth Af]SCOP2B SuperfamilyTranslational proteins8087451 3000811 SCOP2B (2022-06-29)
ZB [auth Ap]SCOP2B SuperfamilyZn-binding ribosomal proteins8103126 3001320 SCOP2B (2022-06-29)
BC [auth DC]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8043947 3000100 SCOP2B (2022-06-29)
BC [auth DC]SCOP2B SuperfamilyEF-G C-terminal domain-like8043949 3001287 SCOP2B (2022-06-29)
BC [auth DC]SCOP2B SuperfamilyRas-like P-loop GTPases8043945 3002022 SCOP2B (2022-06-29)
BC [auth DC]SCOP2B SuperfamilyEF-G C-terminal domain-like8043948 3001287 SCOP2B (2022-06-29)
BC [auth DC]SCOP2B SuperfamilyEF-Tu post-G domain-like8043943 3002024 SCOP2B (2022-06-29)
J [auth BN]SCOP2B SuperfamilyHomeodomain-like8052973 3000001 SCOP2B (2022-06-29)
J [auth BN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052974 3001284 SCOP2B (2022-06-29)
K [auth BO]SCOP2B SuperfamilyTranslational machinery components8095805 3000571 SCOP2B (2022-06-29)
L [auth BV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053136 3000068 SCOP2B (2022-06-29)
M [auth BW]SCOP2B SuperfamilyRibosomal protein S88101311 3000709 SCOP2B (2022-06-29)
R [auth Be]SCOP2B SuperfamilyRibosomal protein S30e-like8053451 3002190 SCOP2B (2022-06-29)
B [auth BB]SCOP2B SuperfamilyRibosomal S3Ae-like8101309 3002166 SCOP2B (2022-06-29)
U [auth BK]SCOP2B SuperfamilyWinged helix DNA-binding domain8055713 3000034 SCOP2B (2022-06-29)
W [auth BQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8103366 3000100 SCOP2B (2022-06-29)
Y [auth BS]SCOP2B SuperfamilyS13-like H2TH domain8098450 3000053 SCOP2B (2022-06-29)
AA [auth BU]SCOP2B SuperfamilyRibosomal protein S108096928 3001336 SCOP2B (2022-06-29)
CA [auth Bc]SCOP2B SuperfamilyNucleic acid-binding proteins8096944 3000135 SCOP2B (2022-06-29)
GA [auth BM]SCOP2B SuperfamilyL30e-like8105620 3001739 SCOP2B (2022-06-29)
D [auth BE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052760 3000334 SCOP2B (2022-06-29)
D [auth BE]SCOP2B SuperfamilyNucleic acid-binding proteins8052759 3000135 SCOP2B (2022-06-29)
D [auth BE]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052758 3001473 SCOP2B (2022-06-29)
OA [auth AD]SCOP2B SuperfamilyTranslational machinery components8096938 3000571 SCOP2B (2022-06-29)
QA [auth AF]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052916 3002152 SCOP2B (2022-06-29)
QA [auth AF]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052917 3001378 SCOP2B (2022-06-29)
TA [auth AI]SCOP2B SuperfamilyRibosomal protein L16p/L10e8101313 3000884 SCOP2B (2022-06-29)
VA [auth AL]SCOP2B SuperfamilyRibosomal protein L13e-like8053159 3002162 SCOP2B (2022-06-29)
E [auth BG]SCOP2B SuperfamilyGS N-terminal domain-like8053173 3000408 SCOP2B (2022-06-29)
ZA [auth AP]SCOP2B SuperfamilyRibosomal protein L228076708 3001078 SCOP2B (2022-06-29)
BB [auth AR]SCOP2B SuperfamilyRibosomal protein L19 (L19e)8077485 3000890 SCOP2B (2022-06-29)
EB [auth AU]SCOP2B Superfamily60S Ribosomal protein L22e8053058 3002158 SCOP2B (2022-06-29)
HB [auth AX]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095962 3000210 SCOP2B (2022-06-29)
IB [auth AY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
KB [auth Aa]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077127 3001045 SCOP2B (2022-06-29)
LB [auth Ab]SCOP2B SuperfamilyRibosomal protein L29e8096930 3002157 SCOP2B (2022-06-29)
MB [auth Ac]SCOP2B SuperfamilyL30e-like8039862 3001739 SCOP2B (2022-06-29)
OB [auth Ae]SCOP2B SuperfamilyRibosomal protein L32e8102036 3000982 SCOP2B (2022-06-29)
QB [auth Ag]SCOP2B SuperfamilyRibosomal protein L34e-like8053547 3002203 SCOP2B (2022-06-29)
SB [auth Ai]SCOP2B SuperfamilyRibosomal protein L36e8053115 3002161 SCOP2B (2022-06-29)
TB [auth Aj]SCOP2B SuperfamilyZn-binding ribosomal proteins8080044 3001320 SCOP2B (2022-06-29)
UB [auth Ak]SCOP2B SuperfamilyRibosomal L38e protein-like8096924 3002206 SCOP2B (2022-06-29)
VB [auth Al]SCOP2B SuperfamilyRibosomal protein L39e8078549 3001756 SCOP2B (2022-06-29)
AC [auth E]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like8096940 3001911 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth BA]PF00318e8ewbBA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
F [auth BH]PF01251e8ewbBH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
G [auth BI]PF01201e8ewbBI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
I [auth BL]PF00366,PF16205e8ewbBL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
N [auth BX]PF00164e8ewbBX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
P [auth Ba]PF01283e8ewbBa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
S [auth BD]PF00189e8ewbBD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
S [auth BD]PF07650e8ewbBD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
T [auth BF]PF00177e8ewbBF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
BA [auth BZ]PF03297e8ewbBZ1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
DA [auth Bd]PF00253e8ewbBd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
FA [auth Bf]PF01599e8ewbBf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
IA [auth AA]PF00181e8ewbAA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
IA [auth AA]PF03947e8ewbAA1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
JA [auth AB]PF00297e8ewbAB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
KA [auth AC]PF00573e8ewbAC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
KA [auth AC]PF14374e8ewbAC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
PA [auth AE]PF01159e8ewbAE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
RA [auth AG]PF01248e8ewbAG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
UA [auth AJ]PF00281,PF00673e8ewbAJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
XA [auth AN]PF00827e8ewbAN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
YA [auth AO]PF00572e8ewbAO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
AB [auth AQ]PF17135e8ewbAQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
CB [auth AS]F_UNCLASSIFIEDe8ewbAS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
CB [auth AS]PF01775e8ewbAS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
DB [auth AT]PF01157e8ewbAT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
FB [auth AV]PF00238e8ewbAV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
GB [auth AW]PF01246e8ewbAW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
JB [auth AZ]PF01777e8ewbAZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01777ECOD (1.6)
PB [auth Af]PF01247e8ewbAf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
XB [auth An]PF05162e8ewbAn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
YB [auth Ao]PF00935e8ewbAo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
ZB [auth Ap]PF01780e8ewbAp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
BC [auth DC]PF03144e8ewbDC5 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF03144ECOD (1.6)
BC [auth DC]PF03764e8ewbDC2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03764ECOD (1.6)
BC [auth DC]PF00679e8ewbDC1 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF00679ECOD (1.6)
BC [auth DC]PF14492e8ewbDC3 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF14492ECOD (1.6)
BC [auth DC]PF00009e8ewbDC4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00009ECOD (1.6)
CC [auth V]PF00466e8ewbV2 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
CC [auth V]PF17777e8ewbV1 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
J [auth BN]PF08069e8ewbBN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
J [auth BN]PF00312e8ewbBN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
K [auth BO]PF00411e8ewbBO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
L [auth BV]PF01249e8ewbBV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
M [auth BW]PF00410e8ewbBW1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
M [auth BW]PF00410e8ewbBW2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
O [auth BY]PF01282e8ewbBY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
Q [auth Bb]PF01667e8ewbBb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
R [auth Be]PF04758e8ewbBe1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
B [auth BB]PF01015e8ewbBB1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
B [auth BB]PF01015e8ewbBB2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
U [auth BK]PF03501e8ewbBK1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
V [auth BP]PF00203e8ewbBP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
W [auth BQ]PF00380e8ewbBQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
X [auth BR]PF00833e8ewbBR1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
Y [auth BS]PF00416e8ewbBS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
Z [auth BT]PF01090e8ewbBT1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
AA [auth BU]PF00338e8ewbBU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
CA [auth Bc]PF01200e8ewbBc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
C [auth BC]PF03719e8ewbBC1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
C [auth BC]PF00333e8ewbBC2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
C [auth BC]PF00333e8ewbBC3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
EA [auth Bg]PF00400e8ewbBg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
GA [auth BM]PF01248e8ewbBM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
D [auth BE]PF00900e8ewbBE1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
D [auth BE]PF00467,PF16121e8ewbBE2 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
D [auth BE]PF00900,PF01479,PF08071e8ewbBE3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
OA [auth AD]PF14204,PF17144e8ewbAD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
QA [auth AF]PF00327,PF08079e8ewbAF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
SA [auth AH]PF00347e8ewbAH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
TA [auth AI]PF00252e8ewbAI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
VA [auth AL]PF01294e8ewbAL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
WA [auth AM]PF00467,PF01929e8ewbAM1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
E [auth BG]PF01092e8ewbBG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
ZA [auth AP]PF00237e8ewbAP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
BB [auth AR]PF01280e8ewbAR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
BB [auth AR]PF01280e8ewbAR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
EB [auth AU]PF01776e8ewbAU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
HB [auth AX]PF00276,PF03939e8ewbAX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
IB [auth AY]PF16906e8ewbAY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
KB [auth Aa]PF00828e8ewbAa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
LB [auth Ab]PF01779e8ewbAb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
MB [auth Ac]PF01248e8ewbAc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
NB [auth Ad]PF01198e8ewbAd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
OB [auth Ae]PF01655e8ewbAe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
QB [auth Ag]PF01199e8ewbAg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
RB [auth Ah]PF00831e8ewbAh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
SB [auth Ai]PF01158e8ewbAi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
TB [auth Aj]PF01907e8ewbAj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
UB [auth Ak]PF01781e8ewbAk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
VB [auth Al]PF00832e8ewbAl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
WB [auth Am]PF01020e8ewbAm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
AC [auth E]PF00687e8ewbE2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
AC [auth E]PF00687e8ewbE1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: PF00687ECOD (1.6)
H [auth BJ]PF00163,PF01479e8ewbBJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth BA]40S ribosomal protein S0-A
F [auth BH]40S ribosomal protein S7-A
G [auth BI]40S ribosomal protein S8-A
I [auth BL]40S ribosomal protein S11-A
N [auth BX]40S ribosomal protein S23-A
P [auth Ba]RPS26B isoform 1
S [auth BD]RPS3 isoform 1
T [auth BF]Rps5p
BA [auth BZ]RPS25A isoform 1- -
DA [auth Bd]RPS29A isoform 1
FA [auth Bf]Ubiquitin-40S ribosomal protein S31
IA [auth AA]60S ribosomal protein L2-A
JA [auth AB]60S ribosomal protein L3
KA [auth AC]RPL4A isoform 1
LA [auth A1]25S rRNA---
MA [auth A3]5s rRNA---
PA [auth AE]60S ribosomal protein L6-A
RA [auth AG]60S ribosomal protein L8-A
UA [auth AJ]RPL11A isoform 1
XA [auth AN]60S ribosomal protein L15-A
YA [auth AO]60S ribosomal protein L16-A
AB [auth AQ]60S ribosomal protein L18-A
CB [auth AS]60S ribosomal protein L20
DB [auth AT]60S ribosomal protein L21-A
FB [auth AV]60S ribosomal protein L23-A
GB [auth AW]RPL24A isoform 1- - -
JB [auth AZ]60S ribosomal protein L27-A
PB [auth Af]60S ribosomal protein L33-A
XB [auth An]60S ribosomal protein L41-A
YB [auth Ao]60S ribosomal protein L42-A
ZB [auth Ap]60S ribosomal protein L43-A
BC [auth DC]Elongation factor 2
CC [auth V]60S acidic ribosomal protein P0
J [auth BN]40S ribosomal protein S13
K [auth BO]40S ribosomal protein S14-A
L [auth BV]40S ribosomal protein S21-A
M [auth BW]RPS22A isoform 1
O [auth BY]40S ribosomal protein S24-A
Q [auth Bb]40S ribosomal protein S27-A
R [auth Be]40S ribosomal protein S30-A
B [auth BB]RPS1A isoform 1
U [auth BK]40S ribosomal protein S10-A
V [auth BP]RPS15 isoform 1
W [auth BQ]40S ribosomal protein S16-A
X [auth BR]40S ribosomal protein S17-A
Y [auth BS]40S ribosomal protein S18-A
Z [auth BT]40S ribosomal protein S19-A
AA [auth BU]RPS20 isoform 1
CA [auth Bc]RPS28A isoform 1
C [auth BC]RPS2 isoform 1
EA [auth Bg]Guanine nucleotide-binding protein subunit beta-like protein
GA [auth BM]40S ribosomal protein S12
HA [auth B5]18S rRNA---
D [auth BE]40S ribosomal protein S4-A
NA [auth A4]5.8 S rRNA---
OA [auth AD]RPL5 isoform 1
QA [auth AF]60S ribosomal protein L7-A
SA [auth AH]60S ribosomal protein L9-A
TA [auth AI]RPL10 isoform 1
VA [auth AL]60S ribosomal protein L13-A
WA [auth AM]60S ribosomal protein L14-A
E [auth BG]40S ribosomal protein S6-A
ZA [auth AP]60S ribosomal protein L17-A
BB [auth AR]60S ribosomal protein L19-A
EB [auth AU]60S ribosomal protein L22-A
HB [auth AX]60S ribosomal protein L25
IB [auth AY]60S ribosomal protein L26-A
KB [auth Aa]60S ribosomal protein L28
LB [auth Ab]RPL29 isoform 1
MB [auth Ac]60S ribosomal protein L30
NB [auth Ad]60S ribosomal protein L31-A
OB [auth Ae]RPL32 isoform 1
QB [auth Ag]60S ribosomal protein L34-A
RB [auth Ah]60S ribosomal protein L35-A
SB [auth Ai]60S ribosomal protein L36-A
TB [auth Aj]60S ribosomal protein L37-A
UB [auth Ak]RPL38 isoform 1
VB [auth Al]60S ribosomal protein L39
WB [auth Am]Ubiquitin-60S ribosomal protein L40
AC [auth E]RPL1A isoform 1
H [auth BJ]40S ribosomal protein S9-A
DC [auth EC]Taura syndrome virus (TSV) internal ribosome entry site (IRES) RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth BA]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
A [auth BA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
A [auth BA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
A [auth BA]IPR001865Small ribosomal subunit protein uS2Family
A [auth BA]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
F [auth BH]IPR000554Small ribosomal subunit protein eS7Family
F [auth BH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
G [auth BI]IPR001047Small ribosomal subunit protein eS8Family
G [auth BI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
G [auth BI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
G [auth BI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
I [auth BL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
I [auth BL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
I [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
I [auth BL]IPR000266Small ribosomal subunit protein uS17Family
I [auth BL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
N [auth BX]IPR006032Small ribosomal subunit protein uS12Family
N [auth BX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth BX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
P [auth Ba]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
P [auth Ba]IPR000892Small ribosomal subunit protein eS26Family
P [auth Ba]IPR047864Ribosomal protein eS26, conserved siteConserved Site
S [auth BD]IPR004044K Homology domain, type 2Domain
S [auth BD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
S [auth BD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
S [auth BD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
S [auth BD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
S [auth BD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
S [auth BD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
T [auth BF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
T [auth BF]IPR000235Small ribosomal subunit protein uS7Family
T [auth BF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
T [auth BF]IPR023798Small ribosomal subunit protein uS7 domainDomain
T [auth BF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
BA [auth BZ]IPR004977Small ribosomal subunit protein eS25Family
BA [auth BZ]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
DA [auth Bd]IPR001209Small ribosomal subunit protein uS14Family
DA [auth Bd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
DA [auth Bd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
DA [auth Bd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
FA [auth Bf]IPR002906Small ribosomal subunit protein eS31Domain
FA [auth Bf]IPR019956Ubiquitin domainDomain
FA [auth Bf]IPR019954Ubiquitin conserved siteConserved Site
FA [auth Bf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
FA [auth Bf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth Bf]IPR000626Ubiquitin-like domainDomain
FA [auth Bf]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
IA [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IA [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IA [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IA [auth AA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IA [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IA [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IA [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IA [auth AA]IPR002171Large ribosomal subunit protein uL2Family
JA [auth AB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
JA [auth AB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
JA [auth AB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
JA [auth AB]IPR000597Large ribosomal subunit protein uL3Family
JA [auth AB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
KA [auth AC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
KA [auth AC]IPR002136Large ribosomal subunit protein uL4Family
KA [auth AC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
KA [auth AC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
KA [auth AC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
PA [auth AE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
PA [auth AE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
PA [auth AE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
PA [auth AE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
PA [auth AE]IPR000915Large ribosomal subunit protein eL6Family
RA [auth AG]IPR001921Large ribosomal subunit protein eL8Family
RA [auth AG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
RA [auth AG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
RA [auth AG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
RA [auth AG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
UA [auth AJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
UA [auth AJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
UA [auth AJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
UA [auth AJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
UA [auth AJ]IPR002132Large ribosomal subunit protein uL5Family
XA [auth AN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XA [auth AN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
XA [auth AN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
XA [auth AN]IPR000439Large ribosomal subunit protein eL15Family
YA [auth AO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
YA [auth AO]IPR005822Large ribosomal subunit protein uL13Family
YA [auth AO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
YA [auth AO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
AB [auth AQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
AB [auth AQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
AB [auth AQ]IPR000039Large ribosomal subunit protein eL18Family
AB [auth AQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
CB [auth AS]IPR028877Large ribosomal subunit protein eL20Family
CB [auth AS]IPR023573Large ribosomal subunit protein eL20 domainDomain
CB [auth AS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
DB [auth AT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
DB [auth AT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
DB [auth AT]IPR001147Large ribosomal subunit protein eL21Family
DB [auth AT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FB [auth AV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
FB [auth AV]IPR000218Large ribosomal subunit protein uL14Family
FB [auth AV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
GB [auth AW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
GB [auth AW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
GB [auth AW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
JB [auth AZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
JB [auth AZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
JB [auth AZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JB [auth AZ]IPR001141Large ribosomal subunit protein eL27Family
JB [auth AZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
PB [auth Af]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
PB [auth Af]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
PB [auth Af]IPR001780Large ribosomal subunit protein eL33Family
PB [auth Af]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
XB [auth An]IPR007836Large ribosomal subunit protein eS32Family
YB [auth Ao]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YB [auth Ao]IPR000552Large ribosomal subunit protein eL42Family
ZB [auth Ap]IPR002674Large ribosomal subunit protein eL43Family
ZB [auth Ap]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth Ap]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
BC [auth DC]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
BC [auth DC]IPR000795Translational (tr)-type GTP-binding domainDomain
BC [auth DC]IPR000640Elongation factor EFG, domain V-likeDomain
BC [auth DC]IPR031157Tr-type G domain, conserved siteConserved Site
BC [auth DC]IPR035647EF-G domain III/V-likeHomologous Superfamily
BC [auth DC]IPR041095Elongation Factor G, domain IIDomain
BC [auth DC]IPR004161Translation elongation factor EFTu-like, domain 2Domain
BC [auth DC]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
BC [auth DC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
BC [auth DC]IPR005225Small GTP-binding protein domainDomain
BC [auth DC]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
BC [auth DC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CC [auth V]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
CC [auth V]IPR001790Large ribosomal subunit protein uL10Family
CC [auth V]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
CC [auth V]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
CC [auth V]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
J [auth BN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
J [auth BN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
J [auth BN]IPR000589Small ribosomal subunit protein uS15Family
J [auth BN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
K [auth BO]IPR001971Small ribosomal subunit protein uS11Family
K [auth BO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth BO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
L [auth BV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
L [auth BV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
L [auth BV]IPR001931Small ribosomal subunit protein eS21Family
M [auth BW]IPR000630Small ribosomal subunit protein uS8Family
M [auth BW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
M [auth BW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
O [auth BY]IPR001976Small ribosomal subunit protein eS24Family
O [auth BY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
O [auth BY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
Q [auth Bb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
Q [auth Bb]IPR000592Small ribosomal subunit protein eS27Family
Q [auth Bb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
R [auth Be]IPR006846Small ribosomal subunit protein eS30Family
B [auth BB]IPR001593Small ribosomal subunit protein eS1Family
B [auth BB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
B [auth BB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
U [auth BK]IPR037447Small ribosomal subunit protein eS10Family
U [auth BK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
U [auth BK]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
U [auth BK]IPR005326Plectin/eS10, N-terminalDomain
V [auth BP]IPR002222Small ribosomal subunit protein uS19Family
V [auth BP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
V [auth BP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
V [auth BP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
W [auth BQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
W [auth BQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
W [auth BQ]IPR000754Small ribosomal subunit protein uS9Family
W [auth BQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
X [auth BR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
X [auth BR]IPR001210Small ribosomal subunit protein eS17Family
X [auth BR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
Y [auth BS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
Y [auth BS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
Y [auth BS]IPR001892Small ribosomal subunit protein uS13Family
Y [auth BS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
Z [auth BT]IPR001266Small ribosomal subunit protein eS19Family
Z [auth BT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Z [auth BT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
Z [auth BT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
AA [auth BU]IPR001848Small ribosomal subunit protein uS10Family
AA [auth BU]IPR027486Small ribosomal subunit protein uS10 domainDomain
AA [auth BU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
AA [auth BU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
AA [auth BU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
CA [auth Bc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
CA [auth Bc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth Bc]IPR000289Small ribosomal subunit protein eS28Family
C [auth BC]IPR000851Small ribosomal subunit protein uS5Family
C [auth BC]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
C [auth BC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
C [auth BC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
C [auth BC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
C [auth BC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
C [auth BC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
EA [auth Bg]IPR019775WD40 repeat, conserved siteConserved Site
EA [auth Bg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
EA [auth Bg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
EA [auth Bg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
EA [auth Bg]IPR001680WD40 repeatRepeat
EA [auth Bg]IPR020472G-protein beta WD-40 repeatRepeat
GA [auth BM]IPR000530Small ribosomal subunit protein eS12Family
GA [auth BM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
GA [auth BM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
GA [auth BM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
D [auth BE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
D [auth BE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
D [auth BE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
D [auth BE]IPR002942RNA-binding S4 domainDomain
D [auth BE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
D [auth BE]IPR000876Small ribosomal subunit protein eS4Family
D [auth BE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth BE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
D [auth BE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
D [auth BE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth BE]IPR005824KOWDomain
OA [auth AD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
OA [auth AD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
QA [auth AF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
QA [auth AF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
QA [auth AF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
QA [auth AF]IPR039699Large ribosomal subunit protein uL30Family
QA [auth AF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
QA [auth AF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
QA [auth AF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
SA [auth AH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
SA [auth AH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
SA [auth AH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
SA [auth AH]IPR000702Large ribosomal subunit protein uL6-likeFamily
TA [auth AI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
TA [auth AI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
TA [auth AI]IPR016180Large ribosomal subunit protein uL16 domainDomain
TA [auth AI]IPR047873Large ribosomal subunit protein uL16Family
TA [auth AI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
VA [auth AL]IPR001380Large ribosomal subunit protein eL13Family
VA [auth AL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
WA [auth AM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WA [auth AM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WA [auth AM]IPR039660Large ribosomal subunit protein eL14Family
WA [auth AM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
WA [auth AM]IPR002784Large ribosomal subunit protein eL14 domainDomain
WA [auth AM]IPR005824KOWDomain
E [auth BG]IPR014401Small ribosomal subunit protein eS6-likeFamily
E [auth BG]IPR001377Small ribosomal subunit protein eS6Family
E [auth BG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
ZA [auth AP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
ZA [auth AP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
ZA [auth AP]IPR001063Large ribosomal subunit protein uL22Family
ZA [auth AP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
BB [auth AR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
BB [auth AR]IPR039547Large ribosomal subunit protein eL19Family
BB [auth AR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
BB [auth AR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
BB [auth AR]IPR000196Large ribosomal subunit protein eL19 domainDomain
BB [auth AR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
EB [auth AU]IPR002671Large ribosomal subunit protein eL22Family
EB [auth AU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
HB [auth AX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
HB [auth AX]IPR013025Large ribosomal subunit protein uL23-likeFamily
HB [auth AX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
HB [auth AX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
HB [auth AX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
IB [auth AY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
IB [auth AY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IB [auth AY]IPR005824KOWDomain
IB [auth AY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IB [auth AY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
IB [auth AY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
KB [auth Aa]IPR021131Large ribosomal subunit protein uL15/eL18Domain
KB [auth Aa]IPR030878Large ribosomal subunit protein uL15Family
KB [auth Aa]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
KB [auth Aa]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
LB [auth Ab]IPR002673Large ribosomal subunit protein eL29Family
MB [auth Ac]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
MB [auth Ac]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
MB [auth Ac]IPR039109Large ribosomal subunit protein eL30-likeFamily
MB [auth Ac]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
NB [auth Ad]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
NB [auth Ad]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
NB [auth Ad]IPR000054Large ribosomal subunit protein eL31Family
OB [auth Ae]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
OB [auth Ae]IPR001515Large ribosomal subunit protein eL32Family
OB [auth Ae]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
QB [auth Ag]IPR008195Large ribosomal subunit protein eL34Family
QB [auth Ag]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
RB [auth Ah]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
RB [auth Ah]IPR001854Large ribosomal subunit protein uL29Family
RB [auth Ah]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
RB [auth Ah]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
SB [auth Ai]IPR000509Large ribosomal subunit protein eL36Family
SB [auth Ai]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
TB [auth Aj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
TB [auth Aj]IPR001569Large ribosomal subunit protein eL37Family
TB [auth Aj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
TB [auth Aj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
UB [auth Ak]IPR002675Large ribosomal subunit protein eL38Family
UB [auth Ak]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
VB [auth Al]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
VB [auth Al]IPR000077Large ribosomal subunit protein eL39Family
VB [auth Al]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
WB [auth Am]IPR019954Ubiquitin conserved siteConserved Site
WB [auth Am]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
WB [auth Am]IPR000626Ubiquitin-like domainDomain
WB [auth Am]IPR019956Ubiquitin domainDomain
WB [auth Am]IPR001975Large ribosomal subunit protein eL40 domainDomain
WB [auth Am]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
AC [auth E]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
AC [auth E]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
AC [auth E]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
AC [auth E]IPR002143Large ribosomal subunit protein uL1Family
AC [auth E]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
H [auth BJ]IPR002942RNA-binding S4 domainDomain
H [auth BJ]IPR022801Small ribosomal subunit protein uS4Family
H [auth BJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
H [auth BJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
H [auth BJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
H [auth BJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
JA [auth AB]HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322
LA [auth A1]1MA Parent Component: A

RESIDAA0317

LA [auth A1]5MC Parent Component: C

RESIDAA0317

LA [auth A1]A2M Parent Component: A

RESIDAA0317

LA [auth A1]OMC Parent Component: C

RESIDAA0317

LA [auth A1]OMG Parent Component: G

RESIDAA0317

LA [auth A1]OMU Parent Component: U

RESIDAA0317

LA [auth A1]UR3 Parent Component: U

RESIDAA0317

BC [auth DC]DDE Parent Component: HIS

RESIDAA0317 , AA0040

PSI-MOD :  1'-methyl-L-histidine MOD:00322 , 2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine MOD:00049
HA [auth B5]4AC RESIDAA0317 , AA0040

HA [auth B5]A2M Parent Component: A

RESIDAA0317 , AA0040

HA [auth B5]B8N RESIDAA0317 , AA0040

HA [auth B5]G7M Parent Component: G

RESIDAA0317 , AA0040

HA [auth B5]MA6 Parent Component: A

RESIDAA0317 , AA0040

HA [auth B5]OMC Parent Component: C

RESIDAA0317 , AA0040

HA [auth B5]OMG Parent Component: G

RESIDAA0317 , AA0040

HA [auth B5]OMU Parent Component: U

RESIDAA0317 , AA0040