8EU4 | pdb_00008eu4

Escherichia coli pyruvate kinase A301S

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	PK beta-barrel domain-like	8042564	3001296	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	PK C-terminal domain-like	8044409	3000442	SCOP2B (2022-06-29)
B [auth E]	SCOP2B Superfamily	PK beta-barrel domain-like	8042564	3001296	SCOP2B (2022-06-29)
B [auth E]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
B [auth E]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
B [auth E]	SCOP2B Superfamily	PK C-terminal domain-like	8044409	3000442	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	PK beta-barrel domain-like	8042564	3001296	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	PK C-terminal domain-like	8044409	3000442	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
D [auth G]	SCOP2B Superfamily	PK beta-barrel domain-like	8042564	3001296	SCOP2B (2022-06-29)
D [auth G]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
D [auth G]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
D [auth G]	SCOP2B Superfamily	PK C-terminal domain-like	8044409	3000442	SCOP2B (2022-06-29)
E [auth B]	SCOP2B Superfamily	PK beta-barrel domain-like	8042564	3001296	SCOP2B (2022-06-29)
E [auth B]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
E [auth B]	SCOP2B Superfamily	PK C-terminal domain-like	8044409	3000442	SCOP2B (2022-06-29)
E [auth B]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
H [auth C]	SCOP2B Superfamily	PK C-terminal domain-like	8044409	3000442	SCOP2B (2022-06-29)
H [auth C]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
H [auth C]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
H [auth C]	SCOP2B Superfamily	PK beta-barrel domain-like	8042564	3001296	SCOP2B (2022-06-29)
G [auth H]	SCOP2B Superfamily	PK C-terminal domain-like	8044409	3000442	SCOP2B (2022-06-29)
G [auth H]	SCOP2B Superfamily	PK beta-barrel domain-like	8042564	3001296	SCOP2B (2022-06-29)
G [auth H]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
G [auth H]	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	PK beta-barrel domain-like	8042564	3001296	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Phosphoenolpyruvate/pyruvate domain	8043651	3000510	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	PK C-terminal domain-like	8044409	3000442	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PK_2nd	e8eu4A2	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: PK beta-barrel domain-like	F: PK_2nd	ECOD (1.6)
A	PK_1st	e8eu4A3	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PK_1st	ECOD (1.6)
A	PK_C	e8eu4A1	A: a/b three-layered sandwiches	X: PK C-terminal domain-like (From Topology)	H: PK C-terminal domain-like (From Topology)	T: PK C-terminal domain-like	F: PK_C	ECOD (1.6)
B [auth E]	PK_2nd	e8eu4E2	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: PK beta-barrel domain-like	F: PK_2nd	ECOD (1.6)
B [auth E]	PK_1st	e8eu4E3	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PK_1st	ECOD (1.6)
B [auth E]	PK_C	e8eu4E1	A: a/b three-layered sandwiches	X: PK C-terminal domain-like (From Topology)	H: PK C-terminal domain-like (From Topology)	T: PK C-terminal domain-like	F: PK_C	ECOD (1.6)
C [auth D]	PK_2nd	e8eu4D3	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: PK beta-barrel domain-like	F: PK_2nd	ECOD (1.6)
C [auth D]	PK_1st	e8eu4D2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PK_1st	ECOD (1.6)
C [auth D]	PK_C	e8eu4D1	A: a/b three-layered sandwiches	X: PK C-terminal domain-like (From Topology)	H: PK C-terminal domain-like (From Topology)	T: PK C-terminal domain-like	F: PK_C	ECOD (1.6)
D [auth G]	PK_2nd	e8eu4G1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: PK beta-barrel domain-like	F: PK_2nd	ECOD (1.6)
D [auth G]	PK_1st	e8eu4G3	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PK_1st	ECOD (1.6)
D [auth G]	PK_C	e8eu4G2	A: a/b three-layered sandwiches	X: PK C-terminal domain-like (From Topology)	H: PK C-terminal domain-like (From Topology)	T: PK C-terminal domain-like	F: PK_C	ECOD (1.6)
E [auth B]	PK_2nd	e8eu4B3	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: PK beta-barrel domain-like	F: PK_2nd	ECOD (1.6)
E [auth B]	PK_1st	e8eu4B2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PK_1st	ECOD (1.6)
E [auth B]	PK_C	e8eu4B1	A: a/b three-layered sandwiches	X: PK C-terminal domain-like (From Topology)	H: PK C-terminal domain-like (From Topology)	T: PK C-terminal domain-like	F: PK_C	ECOD (1.6)
H [auth C]	PK_2nd	e8eu4C2	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: PK beta-barrel domain-like	F: PK_2nd	ECOD (1.6)
H [auth C]	PK_1st	e8eu4C3	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PK_1st	ECOD (1.6)
H [auth C]	PK_C	e8eu4C1	A: a/b three-layered sandwiches	X: PK C-terminal domain-like (From Topology)	H: PK C-terminal domain-like (From Topology)	T: PK C-terminal domain-like	F: PK_C	ECOD (1.6)
G [auth H]	PK_2nd	e8eu4H1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: PK beta-barrel domain-like	F: PK_2nd	ECOD (1.6)
G [auth H]	PK_1st	e8eu4H3	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PK_1st	ECOD (1.6)
G [auth H]	PK_C	e8eu4H2	A: a/b three-layered sandwiches	X: PK C-terminal domain-like (From Topology)	H: PK C-terminal domain-like (From Topology)	T: PK C-terminal domain-like	F: PK_C	ECOD (1.6)
F	PK_2nd	e8eu4F3	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: PK beta-barrel domain-like	F: PK_2nd	ECOD (1.6)
F	PK_1st	e8eu4F2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PK_1st	ECOD (1.6)
F	PK_C	e8eu4F1	A: a/b three-layered sandwiches	X: PK C-terminal domain-like (From Topology)	H: PK C-terminal domain-like (From Topology)	T: PK C-terminal domain-like	F: PK_C	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	PF02887	Pyruvate kinase, alpha/beta domain (PK_C)	Pyruvate kinase, alpha/beta domain	Pyruvate kinase catalyses the final step in glycolysis, the conversion of phosphoenolpyruvate to pyruvate with concomitant phosphorylation of ADP to ATP [1,2]. The structure of several pyruvate kinases from various organisms have been determined [2, ...	Pyruvate kinase catalyses the final step in glycolysis, the conversion of phosphoenolpyruvate to pyruvate with concomitant phosphorylation of ADP to ATP [1,2]. The structure of several pyruvate kinases from various organisms have been determined [2, 3,4]. The protein comprises three-four domains: a small N-terminal helical domain (absent in bacterial PK), a beta/alpha barrel domain, a beta-barrel domain (inserted within the beta/alpha-barrel domain), and a 3-layer alpha/beta/alpha sandwich domain (represented in this entry). This domain is at the C-terminal of pyruvate kinases and contains the FBP (fructose 1,6-bisphosphate) binding site [2,4,5].	Domain
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	PF00224	Pyruvate kinase, barrel domain (PK)	Pyruvate kinase, barrel domain	This is the barrel domain of pyruvate kinases. This domain represents the beta/alpha barrel and the small beta-barrel domain inserted within it. The active site is found in a cleft between the two domains [1,2,3,4].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	Pyruvate kinase	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding potassium ion binding alkali metal ion binding kinase activity transferase activity catalytic activity transferase activity, transferring phosphorus-containing groups pyruvate kinase activity phosphotransferase activity, alcohol group as acceptor identical protein binding protein binding	ribonucleotide catabolic process pyridine nucleotide catabolic process aerobic respiration oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process nucleoside phosphate catabolic process organic acid metabolic process nucleobase-containing compound metabolic process glycolytic process phosphate-containing compound metabolic process pyridine-containing compound metabolic process small molecule metabolic process ribonucleotide catabolic process pyridine nucleotide catabolic process aerobic respiration oxoacid metabolic process carbohydrate catabolic process carbohydrate derivative metabolic process organophosphate catabolic process nucleoside phosphate catabolic process organic acid metabolic process nucleobase-containing compound metabolic process glycolytic process phosphate-containing compound metabolic process pyridine-containing compound metabolic process small molecule metabolic process purine ribonucleotide catabolic process phosphorus metabolic process nucleoside phosphate metabolic process nicotinamide nucleotide metabolic process pyruvate metabolic process purine nucleoside diphosphate metabolic process primary metabolic process purine-containing compound catabolic process nucleotide metabolic process nucleobase-containing compound catabolic process nucleoside diphosphate metabolic process purine nucleoside diphosphate catabolic process nucleoside diphosphate catabolic process metabolic process nucleoside triphosphate metabolic process monocarboxylic acid metabolic process purine ribonucleotide metabolic process pyridine-containing compound catabolic process ribose phosphate metabolic process cellular respiration catabolic process ATP metabolic process energy derivation by oxidation of organic compounds purine nucleotide metabolic process ribonucleotide metabolic process nucleobase-containing small molecule metabolic process purine ribonucleoside triphosphate metabolic process ribonucleoside diphosphate metabolic process ribonucleoside diphosphate catabolic process nucleotide catabolic process purine nucleoside triphosphate metabolic process purine nucleotide catabolic process carbohydrate metabolic process carbohydrate derivative catabolic process ADP catabolic process carboxylic acid metabolic process generation of precursor metabolites and energy purine-containing compound metabolic process ADP metabolic process organophosphate metabolic process purine ribonucleoside diphosphate metabolic process cellular process purine ribonucleoside diphosphate catabolic process response to stimulus response to stress response to heat response to abiotic stimulus response to temperature stimulus	cellular anatomical structure membrane intracellular anatomical structure cytoplasm cytosol transferase complex, transferring phosphorus-containing groups protein-containing complex pyruvate kinase complex catalytic complex transferase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	IPR015795	Pyruvate kinase, C-terminal	Domain
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily	Homologous Superfamily
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	IPR011037	Pyruvate kinase-like, insert domain superfamily	Homologous Superfamily
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	IPR015806	Pyruvate kinase, insert domain superfamily	Homologous Superfamily
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	IPR036918	Pyruvate kinase, C-terminal domain superfamily	Homologous Superfamily
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	IPR001697	Pyruvate kinase	Family
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	IPR018209	Pyruvate kinase, active site	Active Site
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	IPR040442	Pyruvate kinase-like domain superfamily	Homologous Superfamily
A, B [auth E], C [auth D], D [auth G], E [auth B], A, B [auth E], C [auth D], D [auth G], E [auth B], F, G [auth H], H [auth C]	IPR015793	Pyruvate kinase, barrel	Domain

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Escherichia coli pyruvate kinase A301S

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

8EU4 | pdb_00008eu4